Variant report

Variant	rs7036168
Chromosome Location	chr9:116438409-116438410
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr9:116437564..116439263-chr9:116446104..116447691,2	K562	blood:
2	chr9:116435788..116437456-chr9:116437695..116439627,2	MCF-7	breast:

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs7027210	1.00[AMR][1000 genomes]
rs7853139	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530949	chr9:115821128-116487796	Flanking Active TSS Enhancers Active TSS Weak transcription Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	71 gene(s)	inside rSNPs	diseases
2	nsv430093	chr9:116330446-117325446	Weak transcription Enhancers Strong transcription Flanking Active TSS Bivalent/Poised TSS Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	165 gene(s)	inside rSNPs	diseases
3	nsv893749	chr9:116378759-116439749	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
4	nsv466512	chr9:116413751-116446881	Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Genic enhancers	Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
5	nsv615220	chr9:116413751-116446881	Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Genic enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:30 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:116432400-116444000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
2	chr9:116434400-116439800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr9:116435000-116439000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr9:116435600-116439000	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
5	chr9:116435600-116439600	Enhancers	NHLF	lung
6	chr9:116435600-116439800	Enhancers	NHDF-Ad	bronchial
7	chr9:116435800-116438800	Enhancers	NHEK	skin
8	chr9:116435800-116439400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
9	chr9:116435800-116439400	Enhancers	Osteobl	bone
10	chr9:116435800-116439600	Enhancers	NH-A	brain
11	chr9:116435800-116439800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
12	chr9:116435800-116439800	Enhancers	Muscle Satellite Cultured Cells	--
13	chr9:116435800-116439800	Enhancers	HSMM	muscle
14	chr9:116436000-116439600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
15	chr9:116436000-116439600	Enhancers	HUVEC	blood vessel
16	chr9:116436000-116439800	Enhancers	HSMMtube	muscle
17	chr9:116437400-116438800	Enhancers	Fetal Muscle Trunk	muscle
18	chr9:116437400-116439800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
19	chr9:116437600-116439000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
20	chr9:116437600-116439600	Enhancers	Fetal Muscle Leg	muscle
21	chr9:116438000-116439000	Weak transcription	Placenta	Placenta
22	chr9:116438000-116439800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
23	chr9:116438200-116439000	Bivalent Enhancer	Skeletal Muscle Male	skeletal muscle
24	chr9:116438200-116439200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
25	chr9:116438200-116439200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
26	chr9:116438200-116439400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
27	chr9:116438200-116439800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
28	chr9:116438400-116439600	Enhancers	Adipose Nuclei	Adipose
29	chr9:116438400-116441000	Weak transcription	Right Ventricle	heart
30	chr9:116438400-116444800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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