Variant report

Variant	rs7077986
Chromosome Location	chr10:119169158-119169159
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs11197991	0.89[EUR][1000 genomes]
rs11817133	0.82[JPT][hapmap]
rs17096145	0.82[JPT][hapmap]
rs4465301	0.82[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv7565	chr10:119167461-119212529	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:119160000-119172400	Enhancers	Primary neutrophils fromperipheralblood	blood
2	chr10:119164400-119170200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
3	chr10:119164600-119170200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
4	chr10:119164800-119173400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr10:119165200-119170400	Weak transcription	Duodenum Mucosa	Duodenum
6	chr10:119165800-119170200	Weak transcription	Liver	Liver
7	chr10:119166200-119173800	Enhancers	Primary hematopoietic stem cells	blood
8	chr10:119166600-119169600	Weak transcription	HepG2	liver
9	chr10:119167600-119171400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
10	chr10:119167600-119172200	Enhancers	Primary hematopoietic stem cells short term culture	blood
11	chr10:119167800-119169400	Flanking Active TSS	K562	blood
12	chr10:119168400-119169600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
13	chr10:119168400-119170400	Enhancers	Spleen	Spleen
14	chr10:119168600-119171600	Weak transcription	Esophagus	oesophagus
15	chr10:119168800-119169800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
16	chr10:119169000-119169400	Enhancers	Lung	lung
17	chr10:119169000-119170000	Enhancers	NHEK	skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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