Variant report

Variant	rs7084997
Chromosome Location	chr10:52655646-52655647
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 22 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10994652	0.88[YRI][hapmap]
rs12241999	0.88[YRI][hapmap]
rs12242265	0.88[YRI][hapmap]
rs12245610	0.88[YRI][hapmap]
rs12247876	0.88[YRI][hapmap]
rs12248117	0.88[YRI][hapmap]
rs12250710	0.88[YRI][hapmap]
rs12252902	0.88[YRI][hapmap]
rs12255568	0.88[YRI][hapmap]
rs12256013	0.88[YRI][hapmap]
rs12257587	0.88[YRI][hapmap]
rs12262186	0.88[YRI][hapmap]
rs12263224	0.88[YRI][hapmap]
rs12268784	0.88[YRI][hapmap]
rs12268905	0.88[YRI][hapmap]
rs7069595	1.00[AMR][1000 genomes]
rs7077103	0.88[YRI][hapmap]
rs7082887	1.00[YRI][hapmap]
rs7094591	1.00[YRI][hapmap]
rs7099856	0.88[YRI][hapmap]
rs7100444	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv971910	chr10:52653523-52661089	Enhancers Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:52653600-52656400	Weak transcription	Pancreatic Islets	Pancreatic Islet

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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