Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:47701464..47704158-chr11:47707754..47709950,3	K562	blood:

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs10690121	1.00[AMR][1000 genomes]
rs10769279	1.00[AMR][1000 genomes]
rs10769281	1.00[AMR][1000 genomes]
rs10769283	1.00[AMR][1000 genomes]
rs10769293	1.00[MEX][hapmap]
rs10838735	0.93[MKK][hapmap];1.00[AMR][1000 genomes]
rs11039309	1.00[AMR][1000 genomes]
rs11039312	0.84[LWK][hapmap];1.00[MEX][hapmap];1.00[AMR][1000 genomes]
rs2045614	1.00[AFR][1000 genomes]
rs2233354	0.92[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];1.00[AMR][1000 genomes]
rs4256934	1.00[MEX][hapmap];1.00[AMR][1000 genomes]
rs4284367	1.00[AMR][1000 genomes]
rs4303193	1.00[AMR][1000 genomes]
rs4331047	0.84[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];1.00[AMR][1000 genomes]
rs4418760	0.84[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];1.00[AMR][1000 genomes]
rs4434961	1.00[AMR][1000 genomes]
rs4486587	0.84[LWK][hapmap];1.00[MEX][hapmap];0.96[MKK][hapmap];1.00[AMR][1000 genomes]
rs4623856	0.84[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];1.00[AMR][1000 genomes]
rs4752859	1.00[AMR][1000 genomes]
rs4752863	1.00[MEX][hapmap]
rs6416137	0.84[LWK][hapmap];1.00[MEX][hapmap];0.97[MKK][hapmap];1.00[AMR][1000 genomes]
rs6485760	1.00[AMR][1000 genomes]
rs6485762	1.00[AMR][1000 genomes]
rs6485764	1.00[AMR][1000 genomes]
rs7103092	1.00[AMR][1000 genomes]
rs7105845	1.00[AMR][1000 genomes]
rs7107473	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7109012	1.00[AMR][1000 genomes]
rs7118271	1.00[AMR][1000 genomes]
rs7125276	1.00[MEX][hapmap]
rs7129821	1.00[AMR][1000 genomes]
rs7130715	1.00[MEX][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv469858	chr11:47647515-47837172	Weak transcription Strong transcription Flanking Active TSS Genic enhancers Enhancers Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	70 gene(s)	inside rSNPs	diseases
2	nsv1052397	chr11:47675470-48594256	Weak transcription Strong transcription Genic enhancers Enhancers Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	97 gene(s)	inside rSNPs	diseases
3	nsv832143	chr11:47700808-47883540	Weak transcription Transcr. at gene 5' and 3' Enhancers Strong transcription Genic enhancers ZNF genes & repeats Active TSS Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	74 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:47689400-47711200	Weak transcription	Liver	Liver
2	chr11:47704200-47709800	Weak transcription	Rectal Mucosa Donor 29	rectum
3	chr11:47704400-47709000	Weak transcription	Fetal Intestine Small	intestine
4	chr11:47704400-47709800	Weak transcription	Rectal Mucosa Donor 31	rectum
5	chr11:47704400-47711200	Weak transcription	Duodenum Mucosa	Duodenum
6	chr11:47704400-47712000	Weak transcription	Sigmoid Colon	Sigmoid Colon
7	chr11:47704600-47709600	Weak transcription	Fetal Intestine Large	intestine
8	chr11:47705600-47735600	Weak transcription	Primary B cells from cord blood	blood
9	chr11:47708000-47712200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland

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