Variant report
| Variant | rs7109960 |
|---|---|
| Chromosome Location | chr11:34188537-34188538 |
| allele | G/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr11:34169600-34196200 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 2 | chr11:34172600-34190400 | Strong transcription | Fetal Intestine Small | intestine |
| 3 | chr11:34173200-34195600 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 4 | chr11:34173400-34189400 | Strong transcription | HSMMtube | muscle |
| 5 | chr11:34174400-34190800 | Weak transcription | Colonic Mucosa | Colon |
| 6 | chr11:34174600-34193400 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 7 | chr11:34176600-34188600 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 8 | chr11:34176800-34195600 | Weak transcription | Monocytes-CD14+_RO01746 | blood |
| 9 | chr11:34177000-34196200 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 10 | chr11:34177200-34190200 | Strong transcription | Primary neutrophils fromperipheralblood | blood |
| 11 | chr11:34177400-34195400 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 12 | chr11:34177600-34194600 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 13 | chr11:34177600-34196200 | Weak transcription | Primary T cells from cord blood | blood |
| 14 | chr11:34177800-34195800 | Weak transcription | Spleen | Spleen |
| 15 | chr11:34177800-34196000 | Weak transcription | GM12878-XiMat | blood |
| 16 | chr11:34178800-34192600 | Strong transcription | Skeletal Muscle Male | skeletal muscle |
| 17 | chr11:34178800-34195200 | Weak transcription | Hela-S3 | cervix |
| 18 | chr11:34179200-34191000 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 19 | chr11:34179200-34195400 | Weak transcription | Adipose Nuclei | Adipose |
| 20 | chr11:34179400-34196000 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 21 | chr11:34179600-34189400 | Weak transcription | Lung | lung |
| 22 | chr11:34179600-34193600 | Strong transcription | Liver | Liver |
| 23 | chr11:34180000-34195200 | Strong transcription | HepG2 | liver |
| 24 | chr11:34180600-34195400 | Weak transcription | Fetal Thymus | thymus |
| 25 | chr11:34180800-34189400 | Strong transcription | Primary hematopoietic stem cells short term culture | blood |
| 26 | chr11:34181000-34190000 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 27 | chr11:34181400-34195400 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 28 | chr11:34181800-34190200 | Strong transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 29 | chr11:34181800-34190200 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 30 | chr11:34182200-34195400 | Weak transcription | Osteobl | bone |
| 31 | chr11:34182400-34189200 | Genic enhancers | Placenta | Placenta |
| 32 | chr11:34182400-34191600 | Weak transcription | Left Ventricle | heart |
| 33 | chr11:34182600-34190000 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 34 | chr11:34182800-34196000 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 35 | chr11:34183000-34191800 | Strong transcription | Right Ventricle | heart |
| 36 | chr11:34183000-34195200 | Strong transcription | Stomach Smooth Muscle | stomach |
| 37 | chr11:34183600-34198000 | Weak transcription | Fetal Lung | lung |
| 38 | chr11:34183800-34188600 | Weak transcription | Thymus | Thymus |
| 39 | chr11:34183800-34194400 | Strong transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 40 | chr11:34184000-34190200 | Weak transcription | NH-A | brain |
| 41 | chr11:34184200-34190000 | Weak transcription | Pancreas | Pancrea |
| 42 | chr11:34184200-34191800 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 43 | chr11:34184200-34195400 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 44 | chr11:34184200-34195400 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 45 | chr11:34184200-34195800 | Weak transcription | Rectal Smooth Muscle | rectum |
| 46 | chr11:34184400-34195400 | Weak transcription | Brain Cingulate Gyrus | brain |
| 47 | chr11:34184600-34196000 | Weak transcription | Gastric | stomach |
| 48 | chr11:34184800-34195400 | Weak transcription | Brain Anterior Caudate | brain |
| 49 | chr11:34185000-34195400 | Weak transcription | Brain Angular Gyrus | brain |
| 50 | chr11:34185200-34190000 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
