The 2.0 version of rSNPBase

Variant report

Variant rs7111411
Chromosome Location chr11:17988313-17988314
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:108 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:17934400-18033600 Weak transcription Small Intestine intestine
2 chr11:17943800-17992800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
3 chr11:17944000-18026600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
4 chr11:17945400-18010000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr11:17945400-18033400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr11:17957200-17994200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr11:17959200-18007600 Weak transcription iPS-18 Cell Line embryonic stem cell
8 chr11:17961000-18016200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr11:17965400-17994400 Weak transcription NH-A brain
10 chr11:17966000-17992600 Weak transcription Pancreatic Islets Pancreatic Islet
11 chr11:17966400-18014400 Weak transcription Fetal Thymus thymus
12 chr11:17966600-17994200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
13 chr11:17968600-18007000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
14 chr11:17971200-18026000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
15 chr11:17971600-17994200 Weak transcription Muscle Satellite Cultured Cells --
16 chr11:17972800-17994200 Weak transcription NHEK skin
17 chr11:17973800-18008000 Weak transcription HUES64 Cell Line embryonic stem cell
18 chr11:17974200-18007000 Weak transcription Fetal Lung lung
19 chr11:17974400-18001200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
20 chr11:17974400-18007200 Weak transcription Stomach Mucosa stomach
21 chr11:17974400-18007400 Weak transcription H1 Cell Line embryonic stem cell
22 chr11:17974600-18008600 Weak transcription K562 blood
23 chr11:17975000-18020200 Weak transcription A549 lung
24 chr11:17975400-17994200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr11:17976200-17994200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr11:17976600-17994200 Weak transcription HSMM muscle
27 chr11:17976600-17994400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
28 chr11:17976600-17994400 Weak transcription Fetal Muscle Leg muscle
29 chr11:17976600-17999000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
30 chr11:17976600-18006800 Weak transcription Right Ventricle heart
31 chr11:17976800-17994400 Weak transcription Fetal Heart heart
32 chr11:17977000-17992000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr11:17977200-17988800 Weak transcription Left Ventricle heart
34 chr11:17977200-17992800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr11:17977200-17994200 Weak transcription HMEC breast
36 chr11:17977200-18000200 Weak transcription Psoas Muscle Psoas
37 chr11:17977400-18006800 Weak transcription Fetal Muscle Trunk muscle
38 chr11:17977400-18007000 Weak transcription Colon Smooth Muscle Colon
39 chr11:17977600-18008400 Weak transcription HUES48 Cell Line embryonic stem cell
40 chr11:17978200-17994400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr11:17978200-18016200 Weak transcription Primary T killer naive cells fromperipheralblood blood
42 chr11:17978400-17988600 Weak transcription Fetal Adrenal Gland Adrenal Gland
43 chr11:17978600-17988600 Weak transcription Gastric stomach
44 chr11:17978600-17988800 Weak transcription Primary hematopoietic stem cells blood
45 chr11:17978600-17988800 Weak transcription Pancreas Pancrea
46 chr11:17978600-17991200 Weak transcription Liver Liver
47 chr11:17978600-17993800 Weak transcription Skeletal Muscle Female skeletal muscle
48 chr11:17978600-17998200 Weak transcription H9 Cell Line embryonic stem cell
49 chr11:17978600-18006800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
50 chr11:17978800-17988600 Weak transcription Thymus Thymus

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Last update: Aug 31, 2015