Variant report

Variant	rs7114507
Chromosome Location	chr11:71971573-71971574
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs34738484	1.00[AFR][1000 genomes]
rs45506896	1.00[AFR][1000 genomes]
rs61889249	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7107393	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs7109466	0.87[AMR][1000 genomes]
rs7127051	1.00[ASN][1000 genomes]
rs7936281	1.00[CEU][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7939212	1.00[ASN][1000 genomes]
rs7940087	1.00[ASN][1000 genomes]
rs7950298	0.87[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530623	chr11:71088949-72020418	Enhancers Transcr. at gene 5' and 3' Active TSS Strong transcription Bivalent Enhancer Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	134 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:71971200-71971600	Enhancers	iPS-20b Cell Line	embryonic stem cell
2	chr11:71971200-71971800	Enhancers	H1 Cell Line	embryonic stem cell
3	chr11:71971200-71971800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
4	chr11:71971400-71971800	Enhancers	HUES48 Cell Line	embryonic stem cell
5	chr11:71971400-71972000	Enhancers	iPS-18 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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