The 2.0 version of rSNPBase

Variant report

Variant rs7117404
Chromosome Location chr11:47127153-47127154
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:47121200-47130600 Weak transcription Breast Myoepithelial Primary Cells Breast
2 chr11:47121200-47132600 Weak transcription Fetal Adrenal Gland Adrenal Gland
3 chr11:47121400-47129000 Weak transcription Hela-S3 cervix
4 chr11:47121600-47140200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr11:47122000-47127400 Weak transcription Stomach Mucosa stomach
6 chr11:47122400-47140400 Weak transcription Pancreas Pancrea
7 chr11:47123000-47132600 Enhancers Cortex derived primary cultured neurospheres brain
8 chr11:47123600-47127600 Weak transcription Brain Inferior Temporal Lobe brain
9 chr11:47124600-47128200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
10 chr11:47124600-47132800 Weak transcription Thymus Thymus
11 chr11:47124600-47133000 Weak transcription Fetal Thymus thymus
12 chr11:47124600-47159000 Weak transcription Primary T cells from cord blood blood
13 chr11:47125000-47128400 Enhancers Brain Anterior Caudate brain
14 chr11:47125200-47129400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
15 chr11:47125200-47132400 Enhancers Fetal Muscle Leg muscle
16 chr11:47125400-47127400 Enhancers HSMM muscle
17 chr11:47125400-47128400 Enhancers Brain Substantia Nigra brain
18 chr11:47125400-47133400 Enhancers Fetal Lung lung
19 chr11:47125600-47127200 Enhancers HUES64 Cell Line embryonic stem cell
20 chr11:47125600-47127400 Enhancers Sigmoid Colon Sigmoid Colon
21 chr11:47125600-47128400 Enhancers Brain Hippocampus Middle brain
22 chr11:47125600-47129200 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr11:47125800-47127400 Enhancers Placenta Placenta
24 chr11:47125800-47128200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
25 chr11:47125800-47128200 Enhancers Brain Cingulate Gyrus brain
26 chr11:47125800-47128800 Enhancers Fetal Kidney kidney
27 chr11:47125800-47129000 Enhancers Rectal Mucosa Donor 31 rectum
28 chr11:47125800-47129200 Enhancers Duodenum Mucosa Duodenum
29 chr11:47125800-47129400 Enhancers Fetal Intestine Small intestine
30 chr11:47126000-47127200 Enhancers Rectal Mucosa Donor 29 rectum
31 chr11:47126000-47127400 Enhancers Gastric stomach
32 chr11:47126000-47128400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
33 chr11:47126000-47128600 Weak transcription Fetal Muscle Trunk muscle
34 chr11:47126200-47127200 Weak transcription Fetal Intestine Large intestine
35 chr11:47126200-47127600 Weak transcription Fetal Brain Male brain
36 chr11:47126200-47127800 Enhancers HSMMtube muscle
37 chr11:47126400-47128000 Weak transcription Fetal Stomach stomach
38 chr11:47126400-47128200 Weak transcription Small Intestine intestine
39 chr11:47126400-47128400 Weak transcription Brain Germinal Matrix brain
40 chr11:47126400-47132000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr11:47126600-47127600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
42 chr11:47126600-47128000 Weak transcription Duodenum Smooth Muscle Duodenum
43 chr11:47126600-47130800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr11:47126600-47133200 Weak transcription Placenta Amnion Placenta Amnion
45 chr11:47126800-47128200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr11:47126800-47128600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
47 chr11:47126800-47129400 Weak transcription Fetal Brain Female brain
48 chr11:47126800-47129600 Weak transcription NHLF lung
49 chr11:47126800-47130600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
50 chr11:47126800-47130600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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Last update: Aug 31, 2015