Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10466676	1.00[CEU][hapmap];0.90[YRI][hapmap]
rs11228659	1.00[CEU][hapmap];0.86[YRI][hapmap]
rs11228683	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs11228703	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs11606499	1.00[CEU][hapmap];0.82[YRI][hapmap];0.87[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs12271019	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs12292656	1.00[CEU][hapmap];0.95[YRI][hapmap]
rs1397049	1.00[CEU][hapmap]
rs1397053	1.00[JPT][hapmap]
rs1912373	0.83[ASN][1000 genomes]
rs1912374	0.83[ASN][1000 genomes]
rs1945270	1.00[CEU][hapmap]
rs28362018	0.84[AFR][1000 genomes];0.90[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs41391545	1.00[CEU][hapmap]
rs66602972	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs66867918	1.00[ASN][1000 genomes]
rs7111150	1.00[CEU][hapmap];0.85[YRI][hapmap]
rs7112358	0.95[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs7121276	1.00[CEU][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7483053	1.00[CEU][hapmap]
rs7948303	1.00[CEU][hapmap];0.86[YRI][hapmap];0.90[AMR][1000 genomes];0.99[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1050024	chr11:55900482-56518943	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	52 gene(s)	inside rSNPs	diseases
2	nsv497854	chr11:55917298-56537994	Enhancers ZNF genes & repeats Active TSS Weak transcription Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	50 gene(s)	inside rSNPs	diseases
3	nsv949349	chr11:56371633-56593610	Enhancers Flanking Active TSS Active TSS Weak transcription Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	18 gene(s)	inside rSNPs	diseases
4	nsv1051853	chr11:56393347-56523720	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	12 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:56455400-56456800	Enhancers	Dnd41	blood

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