Variant report

Variant	rs7123301
Chromosome Location	chr11:17163427-17163428
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 134 )
Associated
traits (count: 13 )

rSNPs within LD-proxies of this variant (count:131)

rs_ID	r²[population]
rs10741724	0.84[AFR][1000 genomes];0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs10766381	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10832733	0.94[ASW][hapmap];1.00[CEU][hapmap];0.91[CHB][hapmap];0.96[CHD][hapmap];0.80[GIH][hapmap];1.00[JPT][hapmap];0.97[LWK][hapmap];0.95[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.87[AFR][1000 genomes];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10832734	0.82[AMR][1000 genomes]
rs10832735	0.80[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs10832736	0.81[AFR][1000 genomes];0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10832739	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10832743	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10832745	0.85[AFR][1000 genomes];0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10832746	0.80[AFR][1000 genomes];0.80[AMR][1000 genomes];0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10832747	0.91[CEU][hapmap];0.92[JPT][hapmap];0.91[YRI][hapmap];0.85[AFR][1000 genomes];0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10832748	0.84[AFR][1000 genomes];0.81[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs10832752	0.86[JPT][hapmap]
rs11024143	0.86[EUR][1000 genomes]
rs11024148	0.94[ASW][hapmap];0.96[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];0.95[MEX][hapmap];0.98[MKK][hapmap];0.91[TSI][hapmap];1.00[YRI][hapmap];0.85[AFR][1000 genomes];0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11024158	0.94[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.87[GIH][hapmap];1.00[JPT][hapmap];0.84[LWK][hapmap];1.00[MEX][hapmap];0.94[MKK][hapmap];1.00[TSI][hapmap];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11024159	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11024163	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11024204	1.00[ASW][hapmap];0.96[CEU][hapmap];0.82[CHB][hapmap];1.00[CHD][hapmap];0.91[GIH][hapmap];1.00[JPT][hapmap];0.93[LWK][hapmap];0.95[MEX][hapmap];0.94[MKK][hapmap];0.95[TSI][hapmap];1.00[YRI][hapmap];0.85[AFR][1000 genomes];0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11024207	0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11024208	0.81[AFR][1000 genomes];0.80[AMR][1000 genomes];0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11024223	0.91[CHD][hapmap];0.86[JPT][hapmap]
rs11024227	0.81[EUR][1000 genomes]
rs1125737	0.89[EUR][1000 genomes]
rs11821773	0.89[AFR][1000 genomes];0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs12280930	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12286505	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1236309	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1236310	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12804000	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1685932	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1979603	0.88[EUR][1000 genomes]
rs1989405	0.96[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2008905	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs2052188	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs214075	0.83[CHD][hapmap]
rs214076	0.83[CHD][hapmap]
rs214082	0.82[CHB][hapmap];0.87[CHD][hapmap];0.92[JPT][hapmap]
rs214083	0.82[CHB][hapmap];0.92[JPT][hapmap]
rs214092	0.81[CHB][hapmap];0.87[CHD][hapmap];0.92[JPT][hapmap]
rs214093	0.82[CHB][hapmap];0.92[JPT][hapmap]
rs214097	0.82[CHB][hapmap];0.87[CHD][hapmap];0.92[JPT][hapmap]
rs214101	0.91[CHD][hapmap]
rs214900	1.00[ASW][hapmap];0.96[CEU][hapmap];0.82[CHB][hapmap];1.00[CHD][hapmap];0.91[GIH][hapmap];1.00[JPT][hapmap];0.86[LWK][hapmap];0.95[MEX][hapmap];0.97[MKK][hapmap];0.98[TSI][hapmap];0.96[YRI][hapmap];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs214901	1.00[ASW][hapmap];0.96[CEU][hapmap];0.82[CHB][hapmap];1.00[CHD][hapmap];0.91[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];0.95[MEX][hapmap];0.98[MKK][hapmap];0.98[TSI][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs214904	0.86[ASN][1000 genomes]
rs214906	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs214907	0.80[ASN][1000 genomes]
rs214909	0.80[AFR][1000 genomes];0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs214910	1.00[ASW][hapmap];0.96[CEU][hapmap];0.82[CHB][hapmap];1.00[CHD][hapmap];0.91[GIH][hapmap];1.00[JPT][hapmap];0.95[LWK][hapmap];0.95[MEX][hapmap];0.94[MKK][hapmap];0.95[TSI][hapmap];0.96[YRI][hapmap];0.88[AFR][1000 genomes];0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs214911	0.80[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs214912	0.84[AFR][1000 genomes];0.84[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs214913	0.88[AFR][1000 genomes];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs214914	0.96[CEU][hapmap];1.00[JPT][hapmap];0.95[YRI][hapmap];0.86[AFR][1000 genomes];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs214915	0.86[AFR][1000 genomes];0.83[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs214916	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs214917	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs214918	0.88[AFR][1000 genomes];0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs214919	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs214920	0.88[AFR][1000 genomes];0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs214921	0.88[AFR][1000 genomes];0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs214922	0.88[AFR][1000 genomes];0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs214923	0.80[ASN][1000 genomes]
rs214925	1.00[ASW][hapmap];0.96[CEU][hapmap];0.82[CHB][hapmap];1.00[CHD][hapmap];0.82[GIH][hapmap];1.00[JPT][hapmap];0.95[LWK][hapmap];0.95[MEX][hapmap];0.94[MKK][hapmap];0.93[TSI][hapmap];0.96[YRI][hapmap];0.88[AFR][1000 genomes];0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs214926	0.85[AFR][1000 genomes];0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs214927	0.96[CEU][hapmap];0.92[YRI][hapmap];0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs214933	0.92[CHB][hapmap];1.00[CHD][hapmap];0.88[ASN][1000 genomes]
rs214935	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.87[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs214936	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.95[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs214937	0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs214939	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs214940	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.86[LWK][hapmap];1.00[MEX][hapmap];0.98[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2171615	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs34591697	0.80[EUR][1000 genomes]
rs35933265	0.83[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs4356203	0.92[CEU][hapmap];0.82[CHB][hapmap];0.87[CHD][hapmap];0.85[JPT][hapmap];0.85[TSI][hapmap];0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs4509731	0.86[EUR][1000 genomes]
rs511119	0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs512852	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs527810	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs536628	0.80[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs542274	0.92[ASN][1000 genomes]
rs545773	0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs550667	1.00[CEU][hapmap];0.96[YRI][hapmap];0.80[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs553711	0.84[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs567033	0.88[AFR][1000 genomes];0.93[ASN][1000 genomes]
rs577207	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs589319	0.82[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59192183	0.83[EUR][1000 genomes]
rs594034	0.89[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs598946	0.86[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs603618	0.96[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];0.92[YRI][hapmap];0.85[AFR][1000 genomes];0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs61357262	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs615358	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs618331	0.96[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.85[AFR][1000 genomes];0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs620241	0.93[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs621246	0.91[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs635802	0.91[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6486352	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6486354	0.82[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs651513	0.91[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs656623	0.80[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs662711	0.91[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs664382	0.86[ASN][1000 genomes]
rs667984	0.91[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs677042	0.85[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs677540	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.90[AFR][1000 genomes];0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs680205	0.80[AFR][1000 genomes];0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7101686	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7106705	0.87[EUR][1000 genomes]
rs7107283	0.85[AFR][1000 genomes];0.82[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7118006	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7118443	0.81[AFR][1000 genomes];0.83[EUR][1000 genomes]
rs7125607	0.96[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.87[AFR][1000 genomes];0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs7342262	0.96[CEU][hapmap];0.82[CHB][hapmap];0.92[JPT][hapmap];0.88[YRI][hapmap];0.88[EUR][1000 genomes]
rs7396382	0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7396958	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7478986	1.00[CEU][hapmap];0.94[EUR][1000 genomes]
rs7925692	0.88[ASW][hapmap];0.96[CEU][hapmap];0.82[CHB][hapmap];0.96[CHD][hapmap];0.91[GIH][hapmap];1.00[JPT][hapmap];0.89[LWK][hapmap];0.91[MEX][hapmap];0.93[MKK][hapmap];0.87[TSI][hapmap];0.96[YRI][hapmap];0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7927240	0.82[CHB][hapmap];1.00[JPT][hapmap];0.80[YRI][hapmap]
rs7932916	0.83[AFR][1000 genomes];0.81[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7935219	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7937176	0.96[CEU][hapmap];0.96[YRI][hapmap];0.89[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7938820	0.94[ASW][hapmap];0.96[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];0.98[LWK][hapmap];0.95[MEX][hapmap];0.98[MKK][hapmap];0.91[TSI][hapmap];0.96[YRI][hapmap];0.82[AFR][1000 genomes]
rs7939750	0.81[AFR][1000 genomes]
rs7940418	0.87[EUR][1000 genomes]
rs7946010	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7946165	0.81[AFR][1000 genomes]
rs7949699	1.00[CEU][hapmap];0.91[CHB][hapmap];1.00[JPT][hapmap];0.85[AFR][1000 genomes];0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9919540	0.81[AFR][1000 genomes]
rs9919600	0.81[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv467711	chr11:17027555-17320797	Weak transcription Strong transcription Active TSS Genic enhancers Flanking Active TSS Enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	55 gene(s)	inside rSNPs	diseases
2	nsv553568	chr11:17027555-17320797	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	55 gene(s)	inside rSNPs	diseases
3	nsv7691	chr11:17151593-17196894	Weak transcription Enhancers Strong transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

mRNA abundance (count:13)

SNP	Gene	Cis/trans	Tissue	Source
rs7123301	NUCB2	cis	Lymphoblastoid	GTEx
rs7123301	SAA4	cis	parietal	SCAN
rs7123301	PDE3B	cis	parietal	SCAN
rs7123301	SPTY2D1	cis	parietal	SCAN
rs7123301	RNU14	cis	multi-tissue	Pritchard
rs7123301	NUCB2	cis	cerebellum	SCAN
rs7123301	SERGEF	cis	parietal	SCAN
rs7123301	NUCB2	cis	lymphoblastoid	seeQTL
rs7123301	NUCB2	cis	multi-tissue	Pritchard
rs7123301	C7orf72	trans	cerebellum	SCAN
rs7123301	OR7E14P	cis	Esophagus Mucosa	GTEx
rs7123301	OR7E14P	cis	Nerve Tibial	GTEx
rs7123301	GTF2H1	cis	cerebellum	SCAN

Chromatin state (count:124 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:17105400-17172800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr11:17107000-17167200	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr11:17108200-17177400	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr11:17108600-17172800	Weak transcription	Pancreatic Islets	Pancreatic Islet
5	chr11:17111600-17182000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
6	chr11:17120400-17181600	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
7	chr11:17120800-17166200	Weak transcription	Pancreas	Pancrea
8	chr11:17120800-17171800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
9	chr11:17120800-17172200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
10	chr11:17121000-17178000	Weak transcription	Psoas Muscle	Psoas
11	chr11:17125400-17172200	Weak transcription	Fetal Brain Male	brain
12	chr11:17125800-17181400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
13	chr11:17126800-17186400	Weak transcription	Colonic Mucosa	Colon
14	chr11:17130200-17174600	Weak transcription	Spleen	Spleen
15	chr11:17130200-17203800	Weak transcription	Aorta	Aorta
16	chr11:17132000-17167800	Weak transcription	Right Ventricle	heart
17	chr11:17139000-17171200	Weak transcription	Fetal Brain Female	brain
18	chr11:17140000-17183400	Weak transcription	Small Intestine	intestine
19	chr11:17143000-17163800	Weak transcription	Gastric	stomach
20	chr11:17144200-17192800	Weak transcription	NHDF-Ad	bronchial
21	chr11:17144600-17166600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
22	chr11:17150800-17165800	Weak transcription	HMEC	breast
23	chr11:17150800-17172000	Weak transcription	Brain Inferior Temporal Lobe	brain
24	chr11:17150800-17186000	Weak transcription	NHLF	lung
25	chr11:17151000-17165400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
26	chr11:17151000-17173200	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
27	chr11:17154600-17166600	Weak transcription	Ovary	ovary
28	chr11:17155000-17166600	Weak transcription	Fetal Kidney	kidney
29	chr11:17155600-17163800	Weak transcription	Primary B cells from cord blood	blood
30	chr11:17156400-17186400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
31	chr11:17156400-17186600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
32	chr11:17156600-17163800	Weak transcription	Rectal Mucosa Donor 31	rectum
33	chr11:17156600-17164000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
34	chr11:17156600-17164000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
35	chr11:17156600-17164000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
36	chr11:17156600-17164000	Weak transcription	Fetal Stomach	stomach
37	chr11:17156600-17164000	Weak transcription	Rectal Smooth Muscle	rectum
38	chr11:17156600-17165800	Weak transcription	Brain Anterior Caudate	brain
39	chr11:17156600-17165800	Weak transcription	GM12878-XiMat	blood
40	chr11:17156600-17166000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
41	chr11:17156600-17166200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
42	chr11:17156600-17166200	Weak transcription	Primary neutrophils fromperipheralblood	blood
43	chr11:17156600-17166800	Weak transcription	Thymus	Thymus
44	chr11:17156600-17167200	Weak transcription	H9 Cell Line	embryonic stem cell
45	chr11:17156600-17168000	Weak transcription	Placenta Amnion	Placenta Amnion
46	chr11:17156600-17172600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
47	chr11:17156600-17172800	Weak transcription	Brain Angular Gyrus	brain
48	chr11:17156600-17175400	Weak transcription	Esophagus	oesophagus
49	chr11:17156600-17180800	Weak transcription	Colon Smooth Muscle	Colon
50	chr11:17156600-17182400	Weak transcription	Primary T helper naive cells from peripheral blood	blood

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