The 2.0 version of rSNPBase

Variant report

Variant rs7123632
Chromosome Location chr11:46987701-46987702
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:46959000-46998600 Weak transcription Left Ventricle heart
2 chr11:46959200-46990600 Weak transcription Brain Angular Gyrus brain
3 chr11:46959200-46990600 Weak transcription Brain Inferior Temporal Lobe brain
4 chr11:46959200-46993800 Weak transcription Fetal Adrenal Gland Adrenal Gland
5 chr11:46970600-46993200 Weak transcription Small Intestine intestine
6 chr11:46971000-46992400 Weak transcription Rectal Mucosa Donor 31 rectum
7 chr11:46971600-46995600 Weak transcription Pancreas Pancrea
8 chr11:46971600-47006600 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr11:46974000-46989600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
10 chr11:46974200-46998600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
11 chr11:46974200-47008400 Weak transcription Primary T cells from cord blood blood
12 chr11:46980400-46998600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr11:46980400-46998600 Weak transcription Thymus Thymus
14 chr11:46980600-46990600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
15 chr11:46980600-46992600 Weak transcription Fetal Lung lung
16 chr11:46980600-46995400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr11:46980600-46995400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
18 chr11:46980600-46995400 Weak transcription Fetal Stomach stomach
19 chr11:46980600-46998600 Weak transcription Duodenum Smooth Muscle Duodenum
20 chr11:46980600-46999600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
21 chr11:46980600-47014000 Weak transcription Aorta Aorta
22 chr11:46980600-47021000 Weak transcription Ovary ovary
23 chr11:46980600-47026000 Weak transcription HSMM muscle
24 chr11:46981200-47023400 Weak transcription Primary B cells from peripheral blood blood
25 chr11:46981400-46997400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr11:46982600-46997000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
27 chr11:46982800-46993200 Weak transcription Primary hematopoietic stem cells short term culture blood
28 chr11:46982800-46998400 Weak transcription Fetal Brain Female brain
29 chr11:46983000-46993400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr11:46983000-46993800 Weak transcription Primary hematopoietic stem cells blood
31 chr11:46983000-46997000 Weak transcription Cortex derived primary cultured neurospheres brain
32 chr11:46983000-47024000 Weak transcription Primary B cells from cord blood blood
33 chr11:46983200-46993400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr11:46983400-46998600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr11:46984000-46997000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
36 chr11:46985000-46997400 Weak transcription GM12878-XiMat blood
37 chr11:46986400-46993800 Weak transcription Fetal Intestine Small intestine
38 chr11:46986600-46994800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
39 chr11:46986600-46995600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
40 chr11:46986600-46997400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr11:46987200-46988400 Enhancers A549 lung
42 chr11:46987600-46988400 Weak transcription Hela-S3 cervix
43 chr11:46987600-46991000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain

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Last update: Aug 31, 2015