The 2.0 version of rSNPBase

Variant report

Variant rs7125387
Chromosome Location chr11:46135526-46135527
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:91 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:46121800-46139200 Weak transcription Rectal Mucosa Donor 31 rectum
2 chr11:46122000-46139600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
3 chr11:46122600-46140400 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr11:46122600-46140400 Weak transcription Stomach Smooth Muscle stomach
5 chr11:46123400-46137400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
6 chr11:46123800-46138200 Weak transcription Primary T cells fromperipheralblood blood
7 chr11:46127000-46135800 Weak transcription Left Ventricle heart
8 chr11:46127000-46139400 Weak transcription NHEK skin
9 chr11:46127000-46140000 Weak transcription Osteobl bone
10 chr11:46127000-46140800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr11:46127000-46140800 Weak transcription Pancreas Pancrea
12 chr11:46127200-46135800 Weak transcription Primary T killer memory cells from peripheral blood blood
13 chr11:46127200-46136000 Weak transcription Dnd41 blood
14 chr11:46127200-46138200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
15 chr11:46127200-46139600 Weak transcription Right Atrium heart
16 chr11:46127200-46140600 Weak transcription Small Intestine intestine
17 chr11:46128400-46138800 Weak transcription NHDF-Ad bronchial
18 chr11:46128400-46139400 Weak transcription Thymus Thymus
19 chr11:46128600-46135600 Weak transcription Ovary ovary
20 chr11:46128600-46138200 Weak transcription Spleen Spleen
21 chr11:46128600-46139800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
22 chr11:46128600-46140400 Weak transcription Right Ventricle heart
23 chr11:46128800-46135600 Weak transcription Breast Myoepithelial Primary Cells Breast
24 chr11:46128800-46135600 Weak transcription Fetal Brain Female brain
25 chr11:46129000-46135600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr11:46129000-46135600 Weak transcription Fetal Brain Male brain
27 chr11:46129000-46135600 Weak transcription Skeletal Muscle Female skeletal muscle
28 chr11:46129000-46139000 Weak transcription NHLF lung
29 chr11:46129000-46139600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
30 chr11:46129000-46140200 Weak transcription HSMM muscle
31 chr11:46129200-46136200 Weak transcription iPS-15b Cell Line embryonic stem cell
32 chr11:46129600-46136000 Weak transcription ES-I3 Cell Line embryonic stem cell
33 chr11:46130800-46135600 Weak transcription Brain Cingulate Gyrus brain
34 chr11:46130800-46135800 Weak transcription Brain Substantia Nigra brain
35 chr11:46130800-46138200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
36 chr11:46131400-46136000 Weak transcription Rectal Smooth Muscle rectum
37 chr11:46131400-46140800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
38 chr11:46132200-46138400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
39 chr11:46133200-46138200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
40 chr11:46133600-46139800 Enhancers Hela-S3 cervix
41 chr11:46133800-46135600 Weak transcription Cortex derived primary cultured neurospheres brain
42 chr11:46133800-46135600 Weak transcription Fetal Lung lung
43 chr11:46133800-46135800 Weak transcription H1 Cell Line embryonic stem cell
44 chr11:46134000-46140400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
45 chr11:46134200-46136600 Enhancers Brain Inferior Temporal Lobe brain
46 chr11:46134200-46136800 Enhancers Brain Anterior Caudate brain
47 chr11:46134200-46137400 Enhancers Primary T helper cells PMA-I stimulated --
48 chr11:46134200-46137800 Enhancers Primary T helper 17 cells PMA-I stimulated --
49 chr11:46134200-46138400 Enhancers Primary neutrophils fromperipheralblood blood
50 chr11:46134200-46140200 Enhancers Primary hematopoietic stem cells short term culture blood

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Last update: Aug 31, 2015