The 2.0 version of rSNPBase

Variant report

Variant rs71327062
Chromosome Location chr3:46438913-46438914
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:27 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:46425400-46441800 Weak transcription Stomach Mucosa stomach
2 chr3:46425800-46446600 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr3:46428000-46448400 Weak transcription Primary T cells from cord blood blood
4 chr3:46435200-46439000 Enhancers Spleen Spleen
5 chr3:46435400-46440800 Weak transcription Esophagus oesophagus
6 chr3:46435600-46439200 Enhancers Lung lung
7 chr3:46436600-46439000 Enhancers Primary hematopoietic stem cells short term culture blood
8 chr3:46436600-46439200 Enhancers Breast Myoepithelial Primary Cells Breast
9 chr3:46437200-46440400 Weak transcription K562 blood
10 chr3:46437200-46446800 Weak transcription Hela-S3 cervix
11 chr3:46437400-46439200 Enhancers Skeletal Muscle Male skeletal muscle
12 chr3:46437400-46439200 Enhancers Skeletal Muscle Female skeletal muscle
13 chr3:46437600-46445000 Weak transcription Fetal Intestine Small intestine
14 chr3:46437800-46441200 Weak transcription HSMM muscle
15 chr3:46438200-46440600 Weak transcription Adipose Nuclei Adipose
16 chr3:46438200-46443000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr3:46438400-46439200 Enhancers Left Ventricle heart
18 chr3:46438400-46440200 Weak transcription Dnd41 blood
19 chr3:46438600-46439000 Enhancers Pancreas Pancrea
20 chr3:46438600-46439600 Enhancers Psoas Muscle Psoas
21 chr3:46438600-46440600 Weak transcription Monocytes-CD14+_RO01746 blood
22 chr3:46438600-46441000 Weak transcription HSMMtube muscle
23 chr3:46438600-46447000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
24 chr3:46438800-46439000 Enhancers Colonic Mucosa Colon
25 chr3:46438800-46440600 Weak transcription Primary monocytes fromperipheralblood blood
26 chr3:46438800-46447200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr3:46438800-46459800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015