Variant report

Variant	rs7135232
Chromosome Location	chr12:11782006-11782007
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs10491983	0.86[EUR][1000 genomes]
rs17818130	0.86[EUR][1000 genomes]
rs7294361	0.88[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs7294487	0.88[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs7312834	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv898803	chr12:11757867-11794636	Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
2	nsv470267	chr12:11767406-11787989	Flanking Bivalent TSS/Enh Weak transcription Enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Active TSS Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:11776600-11786400	Weak transcription	H1 Cell Line	embryonic stem cell
2	chr12:11776800-11782200	Weak transcription	Thymus	Thymus
3	chr12:11776800-11782800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
4	chr12:11777000-11782200	Weak transcription	H9 Cell Line	embryonic stem cell
5	chr12:11777000-11788200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
6	chr12:11777200-11782200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
7	chr12:11777200-11782600	Weak transcription	Primary hematopoietic stem cells	blood
8	chr12:11777200-11782600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
9	chr12:11777200-11782800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
10	chr12:11779600-11782200	Weak transcription	Lung	lung
11	chr12:11781800-11782200	Weak transcription	Pancreas	Pancrea
12	chr12:11782000-11783000	Weak transcription	GM12878-XiMat	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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