Variant report

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs10150071	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12884777	0.93[CHB][hapmap];0.94[CHD][hapmap];1.00[JPT][hapmap];0.81[MEX][hapmap];0.96[ASN][1000 genomes]
rs17104975	0.92[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs17104979	0.93[JPT][hapmap]
rs17105025	0.94[JPT][hapmap]
rs17105032	0.94[JPT][hapmap];0.85[ASN][1000 genomes]
rs17105061	0.94[JPT][hapmap];0.85[ASN][1000 genomes]
rs1860105	0.94[JPT][hapmap];0.82[ASN][1000 genomes]
rs1989628	0.85[ASN][1000 genomes]
rs2190872	0.94[JPT][hapmap]
rs2238274	0.94[JPT][hapmap];0.82[ASN][1000 genomes]
rs2238275	0.93[JPT][hapmap];0.82[ASN][1000 genomes]
rs2238276	0.94[JPT][hapmap];0.82[ASN][1000 genomes]
rs2238283	0.84[JPT][hapmap]
rs2238285	0.81[JPT][hapmap]
rs2283422	0.93[CHB][hapmap];0.94[CHD][hapmap];1.00[JPT][hapmap];0.82[MEX][hapmap];0.96[ASN][1000 genomes]
rs23219	0.81[JPT][hapmap]
rs4902960	0.94[JPT][hapmap];0.84[ASN][1000 genomes]
rs4902961	0.93[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.86[MEX][hapmap];0.99[ASN][1000 genomes]
rs4902965	0.94[JPT][hapmap];0.82[ASN][1000 genomes]
rs56661004	0.96[ASN][1000 genomes]
rs56731686	0.85[ASN][1000 genomes]
rs58002698	0.82[ASN][1000 genomes]
rs60545259	0.82[ASN][1000 genomes]
rs7156200	0.93[CHB][hapmap];0.94[CHD][hapmap];1.00[JPT][hapmap];0.82[MEX][hapmap];0.96[ASN][1000 genomes]
rs720391	0.85[ASN][1000 genomes]
rs73293246	0.96[ASN][1000 genomes]
rs74060440	0.96[ASN][1000 genomes]
rs764624	0.94[JPT][hapmap];0.82[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530794	chr14:72113818-73034008	Enhancers Bivalent/Poised TSS Weak transcription Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:72426800-72437200	Weak transcription	Left Ventricle	heart
2	chr14:72430400-72435800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr14:72431200-72435400	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
4	chr14:72432400-72434400	Weak transcription	Cortex derived primary cultured neurospheres	brain
5	chr14:72434000-72435000	Flanking Active TSS	GM12878-XiMat	blood

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