Variant report

Variant	rs7145051
Chromosome Location	chr14:32419715-32419716
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr14:32415369..32417109-chr14:32417144..32419896,2	MCF-7	breast:
2	chr14:32412347..32415225-chr14:32417011..32419996,3	MCF-7	breast:
3	chr14:32418462..32421329-chr14:32545887..32548430,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000100852	Chromatin interaction
ENSG00000258474	Chromatin interaction
ENSG00000258655	Chromatin interaction

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs1278946	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs35186026	0.84[AMR][1000 genomes];0.98[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv564182	chr14:32110519-32584337	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases
2	nsv1046526	chr14:32110537-32567426	Weak transcription Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases
3	nsv526200	chr14:32308511-32454372	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS Genic enhancers Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:77 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:32407400-32419800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
2	chr14:32412800-32419800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
3	chr14:32413400-32420800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr14:32413600-32420600	Enhancers	HMEC	breast
5	chr14:32413800-32420800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
6	chr14:32414600-32419800	Weak transcription	Gastric	stomach
7	chr14:32414600-32419800	Weak transcription	Lung	lung
8	chr14:32414600-32419800	Weak transcription	Psoas Muscle	Psoas
9	chr14:32414600-32420000	Weak transcription	Skeletal Muscle Male	skeletal muscle
10	chr14:32414800-32420000	Weak transcription	Pancreas	Pancrea
11	chr14:32415800-32419800	Weak transcription	Rectal Mucosa Donor 29	rectum
12	chr14:32416800-32420600	Enhancers	NHEK	skin
13	chr14:32417600-32419800	Weak transcription	Right Ventricle	heart
14	chr14:32418400-32420800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
15	chr14:32418400-32422000	Enhancers	Placenta	Placenta
16	chr14:32418600-32420800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
17	chr14:32418600-32420800	Enhancers	Placenta Amnion	Placenta Amnion
18	chr14:32418600-32420800	Enhancers	NHDF-Ad	bronchial
19	chr14:32418800-32420000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
20	chr14:32418800-32420600	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
21	chr14:32418800-32420600	Flanking Active TSS	A549	lung
22	chr14:32418800-32420800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
23	chr14:32418800-32421000	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
24	chr14:32418800-32421000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
25	chr14:32418800-32421000	Enhancers	HSMMtube	muscle
26	chr14:32418800-32421200	Enhancers	Fetal Intestine Large	intestine
27	chr14:32418800-32421400	Enhancers	Stomach Mucosa	stomach
28	chr14:32418800-32422000	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
29	chr14:32418800-32422000	Enhancers	Fetal Stomach	stomach
30	chr14:32418800-32422400	Enhancers	K562	blood
31	chr14:32418800-32423600	Enhancers	Fetal Lung	lung
32	chr14:32419000-32420000	Enhancers	Fetal Kidney	kidney
33	chr14:32419000-32420000	Enhancers	HUVEC	blood vessel
34	chr14:32419000-32420600	Enhancers	Muscle Satellite Cultured Cells	--
35	chr14:32419000-32420800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
36	chr14:32419000-32421000	Enhancers	Cortex derived primary cultured neurospheres	brain
37	chr14:32419000-32421000	Enhancers	Fetal Intestine Small	intestine
38	chr14:32419000-32421000	Enhancers	NHLF	lung
39	chr14:32419000-32421200	Enhancers	Fetal Brain Male	brain
40	chr14:32419000-32421400	Enhancers	Fetal Heart	heart
41	chr14:32419200-32420000	Enhancers	Stomach Smooth Muscle	stomach
42	chr14:32419200-32420200	Enhancers	Fetal Brain Female	brain
43	chr14:32419200-32420800	Enhancers	HSMM	muscle
44	chr14:32419200-32421000	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
45	chr14:32419200-32421000	Enhancers	Duodenum Mucosa	Duodenum
46	chr14:32419400-32419800	Enhancers	Brain Angular Gyrus	brain
47	chr14:32419400-32420000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
48	chr14:32419400-32420600	Enhancers	Rectal Mucosa Donor 31	rectum
49	chr14:32419400-32421000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
50	chr14:32419400-32421000	Enhancers	Brain Germinal Matrix	brain

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