Variant report

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	GATA3	chr14:37424624-37425027	MCF-7	breast:	n/a	n/a
2	GATA3	chr14:37424376-37425180	MCF-7	breast:	n/a	n/a
3	FOS	chr14:37424736-37424813	MCF10A-Er-Src	breast:	n/a	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:37411507..37413747-chr14:37421697..37425494,3	K562	blood:

Variant related genes	Relation type
MIR4503	TF binding region

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10131318	1.00[ASN][1000 genomes]
rs10146438	1.00[CHB][hapmap]
rs10149290	1.00[CHB][hapmap]
rs12878874	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs12881110	1.00[CHB][hapmap]
rs12896722	1.00[CHB][hapmap]
rs1367031	1.00[CHB][hapmap]
rs17767143	1.00[CHB][hapmap];0.90[GIH][hapmap];0.88[MEX][hapmap];1.00[ASN][1000 genomes]
rs2021403	1.00[CHB][hapmap]
rs2022717	0.86[EUR][1000 genomes]
rs6571767	1.00[CHB][hapmap]
rs6571768	1.00[CHB][hapmap]
rs712390	1.00[CHB][hapmap]
rs712394	1.00[CHB][hapmap]
rs7143097	1.00[CHB][hapmap]
rs7147556	0.92[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7159402	1.00[CHB][hapmap]
rs7159633	1.00[CHB][hapmap]
rs8017518	1.00[CHB][hapmap]
rs848697	1.00[CHB][hapmap]
rs848698	1.00[CHB][hapmap]
rs848699	1.00[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1047290	chr14:36564568-37445157	Weak transcription Enhancers Bivalent/Poised TSS Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	43 gene(s)	inside rSNPs	diseases
2	nsv534288	chr14:37254539-37697745	Enhancers Active TSS Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	17 gene(s)	inside rSNPs	diseases
3	nsv1050254	chr14:37400173-37445157	Weak transcription Enhancers Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	2 gene(s)	inside rSNPs	diseases
4	esv2830246	chr14:37417440-37424770	Enhancers Weak transcription	TF binding region Chromatin interactive region miRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:37413800-37437400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr14:37414200-37424800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
3	chr14:37420400-37425200	Enhancers	Muscle Satellite Cultured Cells	--
4	chr14:37421000-37424800	Enhancers	HSMMtube	muscle
5	chr14:37421200-37425000	Enhancers	HSMM	muscle
6	chr14:37422600-37425000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
7	chr14:37423600-37426600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
8	chr14:37423600-37428400	Weak transcription	HUES48 Cell Line	embryonic stem cell
9	chr14:37424200-37424800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
10	chr14:37424600-37424800	Enhancers	Osteobl	bone

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