Variant report

Variant	rs7149482
Chromosome Location	chr14:68286295-68286296
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	SP1	chr14:68286158-68286862	H1-hESC	embryonic stem cell:	n/a	chr14:68286531-68286542 chr14:68286438-68286459
2	CHD2	chr14:68286257-68287021	GM12878	blood:	n/a	n/a
3	MAX	chr14:68286216-68287739	A549	lung:	n/a	chr14:68287445-68287455
4	REST	chr14:68286195-68286828	A549	lung:	n/a	n/a
5	POLR2A	chr14:68286261-68287100	GM12892	blood:	n/a	n/a
6	CHD2	chr14:68286262-68286621	K562	blood:	n/a	n/a
7	ZNF384	chr14:68286278-68286419	K562	blood:	n/a	n/a
8	SP1	chr14:68286162-68286794	H1-hESC	embryonic stem cell:	n/a	chr14:68286531-68286542 chr14:68286438-68286459
9	PAX5	chr14:68286249-68286872	GM12878	blood:	n/a	n/a
10	SIX5	chr14:68286265-68286590	K562	blood:	n/a	chr14:68286397-68286411 chr14:68286399-68286408 chr14:68286401-68286410
11	GATA2	chr14:68286287-68286692	SH-SY5Y	brain:	n/a	chr14:68286623-68286633
12	SP1	chr14:68286138-68286690	HepG2	liver:	n/a	chr14:68286531-68286542 chr14:68286438-68286459
13	ETS1	chr14:68286243-68286679	GM12878	blood:	n/a	chr14:68286398-68286411 chr14:68286604-68286617
14	GATA3	chr14:68286178-68286628	T-47D	breast:	n/a	n/a
15	SP1	chr14:68286100-68286969	A549	lung:	n/a	chr14:68286531-68286542 chr14:68286438-68286459 chr14:68286860-68286874
16	IRF3	chr14:68286263-68286624	Hela-S3	cervix:	n/a	chr14:68286604-68286613 chr14:68286579-68286586
17	SIX5	chr14:68286071-68287057	A549	lung:	n/a	chr14:68286397-68286411 chr14:68286399-68286408 chr14:68286401-68286410
18	ZNF143	chr14:68286218-68286863	K562	blood:	n/a	chr14:68286399-68286417 chr14:68286813-68286832 chr14:68286399-68286408 chr14:68286401-68286410 chr14:68286814-68286829
19	PML	chr14:68286280-68286694	GM12878	blood:	n/a	n/a
20	CHD2	chr14:68286253-68286810	H1-hESC	embryonic stem cell:	n/a	n/a
21	POLR2A	chr14:68286277-68286795	HUVEC	blood vessel:	n/a	n/a
22	YY1	chr14:68286253-68286664	SK-N-SH_RA	brain:	n/a	n/a
23	FOS	chr14:68286270-68286679	GM12878	blood:	n/a	chr14:68286447-68286456
24	SIN3AK20	chr14:68286177-68287205	MCF-7	breast:	n/a	n/a
25	ATF2	chr14:68286267-68286711	H1-hESC	embryonic stem cell:	n/a	n/a
26	MAX	chr14:68286292-68287674	A549	lung:	n/a	chr14:68287445-68287455
27	NFYB	chr14:68286271-68286699	K562	blood:	n/a	chr14:68286446-68286460 chr14:68286448-68286458 chr14:68286447-68286462 chr14:68286447-68286460
28	POLR2A	chr14:68286161-68287737	HUVEC	blood vessel:	n/a	n/a
29	RELA	chr14:68286267-68287501	GM12891	blood:	n/a	n/a
30	ETS1	chr14:68286180-68286779	A549	lung:	n/a	chr14:68286398-68286411 chr14:68286604-68286617
31	CREB1	chr14:68286266-68286640	A549	lung:	n/a	n/a
32	IRF1	chr14:68286278-68286622	K562	blood:	n/a	chr14:68286604-68286613 chr14:68286579-68286586
33	ELF1	chr14:68286253-68286651	A549	lung:	n/a	n/a
34	CREB1	chr14:68286237-68286706	HepG2	liver:	n/a	n/a
35	E2F6	chr14:68286243-68286913	A549	lung:	n/a	chr14:68286513-68286527 chr14:68286664-68286673
36	NFIC	chr14:68286195-68287217	GM12878	blood:	n/a	n/a
37	MAX	chr14:68286251-68287702	MCF-7	breast:	n/a	chr14:68287445-68287455
38	FOS	chr14:68286262-68286660	K562	blood:	n/a	chr14:68286447-68286456
39	FOS	chr14:68286275-68286628	Hela-S3	cervix:	n/a	chr14:68286447-68286456
40	SP1	chr14:68286144-68287019	A549	lung:	n/a	chr14:68286531-68286542 chr14:68286438-68286459 chr14:68286860-68286874
41	POLR2A	chr14:68286260-68286930	MCF10A-Er-Src	breast:	n/a	n/a
42	SIX5	chr14:68286210-68286806	A549	lung:	n/a	chr14:68286397-68286411 chr14:68286399-68286408 chr14:68286401-68286410
43	POLR2A	chr14:68286278-68286817	SK-N-SH	brain:	n/a	n/a
44	CREB1	chr14:68286269-68286783	HepG2	liver:	n/a	n/a
45	POLR2A	chr14:68286281-68286758	HepG2	liver:	n/a	n/a
46	SIX5	chr14:68286221-68286694	GM12878	blood:	n/a	chr14:68286397-68286411 chr14:68286399-68286408 chr14:68286401-68286410
47	E2F6	chr14:68286186-68286976	H1-hESC	embryonic stem cell:	n/a	chr14:68286513-68286527 chr14:68286664-68286673
48	SP1	chr14:68286184-68286947	K562	blood:	n/a	chr14:68286531-68286542 chr14:68286438-68286459 chr14:68286860-68286874
49	CREB1	chr14:68286275-68286963	H1-hESC	embryonic stem cell:	n/a	n/a
50	FOSL2	chr14:68286248-68286728	A549	lung:	n/a	chr14:68286447-68286456

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:68282145..68286888-chr14:69256784..69261104,5	MCF-7	breast:
2	chr14:68285810..68288248-chr14:68288285..68290736,2	MCF-7	breast:

Variant related genes	Relation type
RAD51B	TF binding region
ZFYVE26	TF binding region
ENSG00000182185	Chromatin interaction
ENSG00000185650	Chromatin interaction

Extended variants
information (count: 131 )
Associated
traits (count: 2 )

rSNPs within LD-proxies of this variant (count:128)

rs_ID	r²[population]
rs10130919	0.89[CEU][hapmap];0.83[GIH][hapmap];0.92[MEX][hapmap];0.86[TSI][hapmap];0.94[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs10131048	0.84[MEX][hapmap];0.81[AMR][1000 genomes]
rs10133239	0.94[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs10135927	0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10137614	0.96[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs10137930	0.96[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs10141638	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[AMR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10146380	0.88[CEU][hapmap];0.96[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs10150007	0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1033686	0.82[GIH][hapmap]
rs1040598	0.84[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];0.92[MEX][hapmap];0.90[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs10873208	0.94[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs11158693	0.81[CEU][hapmap];0.81[TSI][hapmap]
rs11158694	0.87[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11158697	0.94[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11158700	0.85[AMR][1000 genomes]
rs11158701	0.85[AMR][1000 genomes]
rs11620947	0.89[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11621019	0.84[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11621258	1.00[JPT][hapmap]
rs11622135	1.00[JPT][hapmap]
rs11622521	0.90[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs11622535	0.93[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11623756	0.89[CEU][hapmap];0.96[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11626332	1.00[JPT][hapmap];0.82[AMR][1000 genomes]
rs11626590	0.88[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11626769	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11626778	0.96[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs11626809	0.89[GIH][hapmap]
rs11627100	0.94[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs11627417	0.94[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11627565	0.96[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs11844492	0.94[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11847628	0.89[CEU][hapmap];0.82[GIH][hapmap];0.84[TSI][hapmap];0.82[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs11848769	1.00[JPT][hapmap]
rs11850946	1.00[JPT][hapmap]
rs12431490	0.84[AMR][1000 genomes]
rs12432558	1.00[CHD][hapmap];0.84[GIH][hapmap];1.00[JPT][hapmap];0.84[MEX][hapmap];0.81[AMR][1000 genomes]
rs12433710	0.87[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12433779	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12434751	0.84[AMR][1000 genomes]
rs12435554	1.00[JPT][hapmap]
rs12886915	0.84[MEX][hapmap]
rs12891164	0.88[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.82[MKK][hapmap];0.82[TSI][hapmap];0.94[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12893157	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[AMR][1000 genomes];0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12896666	0.84[MEX][hapmap]
rs1543391	0.88[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.92[MEX][hapmap];0.87[MKK][hapmap];0.82[TSI][hapmap];0.94[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17192558	1.00[CHD][hapmap];0.82[GIH][hapmap];1.00[JPT][hapmap]
rs17192586	1.00[CHD][hapmap];0.82[GIH][hapmap];1.00[JPT][hapmap]
rs17783094	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17783124	0.89[CEU][hapmap];0.82[GIH][hapmap];0.82[LWK][hapmap];0.92[MEX][hapmap];0.86[TSI][hapmap];0.96[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs17783160	0.90[CEU][hapmap];0.94[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs17783304	1.00[JPT][hapmap]
rs1810523	0.88[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];0.91[MEX][hapmap];0.87[MKK][hapmap];0.82[TSI][hapmap];0.80[AFR][1000 genomes];0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs181561	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs181562	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs181563	0.82[CEU][hapmap];0.82[GIH][hapmap];0.82[LWK][hapmap];0.92[MEX][hapmap];0.91[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs181564	1.00[ASW][hapmap];0.92[CEU][hapmap];1.00[CHB][hapmap];0.93[GIH][hapmap];1.00[JPT][hapmap];0.94[LWK][hapmap];0.92[MEX][hapmap];0.98[MKK][hapmap];0.84[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs181565	0.82[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.92[MEX][hapmap];0.87[MKK][hapmap];0.82[TSI][hapmap];0.93[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs181566	0.82[CEU][hapmap];0.88[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs181567	0.80[AFR][1000 genomes];0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs181570	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.92[MEX][hapmap];0.87[MKK][hapmap];0.80[AFR][1000 genomes];0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs181572	0.82[CEU][hapmap];0.82[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs181574	0.80[AFR][1000 genomes];0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs181575	0.82[CEU][hapmap];0.82[GIH][hapmap];0.84[EUR][1000 genomes]
rs181576	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.80[AFR][1000 genomes];0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1956345	0.88[CEU][hapmap];0.94[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1956346	0.89[CEU][hapmap];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1956347	0.94[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1956348	0.94[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1964828	0.86[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2235962	0.81[GIH][hapmap];0.84[MEX][hapmap]
rs2235963	0.84[MEX][hapmap];0.81[AMR][1000 genomes]
rs2235966	0.87[CEU][hapmap]
rs2235967	0.84[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];0.83[MEX][hapmap];0.84[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2295105	0.80[ASN][1000 genomes]
rs2295106	0.88[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs2295107	0.88[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];0.92[MEX][hapmap];0.86[AMR][1000 genomes];0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2331403	0.83[EUR][1000 genomes]
rs28373844	0.96[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs28604984	0.96[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs28623567	0.96[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs28713367	0.84[AMR][1000 genomes]
rs2874131	0.84[MEX][hapmap]
rs2874132	0.88[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];0.92[MEX][hapmap];0.83[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2874133	1.00[JPT][hapmap]
rs34759521	0.80[ASN][1000 genomes]
rs35272075	0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs3742879	1.00[JPT][hapmap]
rs4143685	0.88[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[AMR][1000 genomes];0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4284565	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4402486	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs4902517	0.84[MEX][hapmap]
rs4902519	0.81[AMR][1000 genomes]
rs55854324	1.00[ASN][1000 genomes]
rs55867043	0.87[ASN][1000 genomes]
rs55999745	0.94[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs7142433	0.88[CEU][hapmap];1.00[CHB][hapmap];0.80[AFR][1000 genomes];0.93[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7143196	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs7143496	0.88[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.96[GIH][hapmap];1.00[JPT][hapmap];0.84[MEX][hapmap];0.89[AMR][1000 genomes];0.80[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7145044	1.00[JPT][hapmap]
rs7150705	1.00[JPT][hapmap];0.81[AMR][1000 genomes]
rs7150903	1.00[JPT][hapmap];0.81[AMR][1000 genomes]
rs7151495	1.00[JPT][hapmap];0.88[AMR][1000 genomes]
rs7154635	0.88[CEU][hapmap];0.96[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs7159109	0.96[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7159489	0.82[AMR][1000 genomes]
rs7159622	0.88[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.80[AFR][1000 genomes];0.94[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7159982	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7160196	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs72723196	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72723202	1.00[ASN][1000 genomes]
rs72725103	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72725114	0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs72725127	0.84[AMR][1000 genomes]
rs764088	0.86[AMR][1000 genomes]
rs767972	0.84[MEX][hapmap]
rs8003431	0.89[CEU][hapmap];0.82[GIH][hapmap];0.82[LWK][hapmap];0.92[MEX][hapmap];0.86[TSI][hapmap];0.96[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs8004611	0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8006089	0.84[CEU][hapmap];0.82[GIH][hapmap];0.84[TSI][hapmap];0.90[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs8010086	0.86[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs8011120	0.96[CEU][hapmap];1.00[CHB][hapmap];0.89[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8011393	0.88[CEU][hapmap]
rs8011690	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs8012974	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8017013	0.89[CEU][hapmap];0.82[GIH][hapmap];0.92[MEX][hapmap];0.86[TSI][hapmap];0.94[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs8018709	0.89[CEU][hapmap];0.96[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs932555	0.89[CEU][hapmap];0.96[AMR][1000 genomes];0.91[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1042536	chr14:68136913-68343198	Strong transcription Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
2	nsv542122	chr14:68136913-68343198	Strong transcription Flanking Active TSS Enhancers Active TSS Genic enhancers Weak transcription ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
3	nsv1054697	chr14:68202004-68345982	Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Enhancers Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	11 gene(s)	inside rSNPs	diseases

mRNA abundance (count:2)

SNP	Gene	Cis/trans	Tissue	Source
rs7149482	FAM71D	cis	parietal	SCAN
rs7149482	CHURC1	cis	parietal	SCAN

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:68283600-68286400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr14:68283800-68286400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr14:68283800-68286400	Weak transcription	Lung	lung
4	chr14:68283800-68286400	Weak transcription	Small Intestine	intestine
5	chr14:68284000-68286400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
6	chr14:68284000-68286400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
7	chr14:68284000-68286400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
8	chr14:68284000-68286400	Weak transcription	Aorta	Aorta
9	chr14:68284000-68286400	Weak transcription	Gastric	stomach
10	chr14:68284200-68286400	Weak transcription	H9 Cell Line	embryonic stem cell
11	chr14:68284200-68286400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
12	chr14:68284200-68286400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
13	chr14:68284400-68286400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
14	chr14:68284400-68286400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
15	chr14:68284400-68286400	Weak transcription	Sigmoid Colon	Sigmoid Colon
16	chr14:68284600-68286400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
17	chr14:68284600-68286400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
18	chr14:68285600-68286800	Active TSS	Adipose Nuclei	Adipose
19	chr14:68285600-68287000	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
20	chr14:68285600-68287400	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
21	chr14:68285600-68287400	Active TSS	A549	lung
22	chr14:68285800-68286400	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
23	chr14:68285800-68286400	Active TSS	Primary T helper naive cells fromperipheralblood	blood
24	chr14:68285800-68286800	Active TSS	Primary T helper cells fromperipheralblood	blood
25	chr14:68285800-68286800	Active TSS	Liver	Liver
26	chr14:68285800-68286800	Active TSS	Skeletal Muscle Male	skeletal muscle
27	chr14:68285800-68287000	Active TSS	iPS-15b Cell Line	embryonic stem cell
28	chr14:68285800-68287000	Active TSS	Primary T helper naive cells from peripheral blood	blood
29	chr14:68285800-68287000	Active TSS	Primary T killer naive cells fromperipheralblood	blood
30	chr14:68285800-68287000	Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
31	chr14:68285800-68287000	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
32	chr14:68285800-68287000	Active TSS	Brain Anterior Caudate	brain
33	chr14:68285800-68287000	Active TSS	Brain Germinal Matrix	brain
34	chr14:68285800-68287000	Active TSS	Duodenum Mucosa	Duodenum
35	chr14:68285800-68287000	Active TSS	Fetal Muscle Leg	muscle
36	chr14:68285800-68287000	Active TSS	Rectal Mucosa Donor 29	rectum
37	chr14:68285800-68287000	Active TSS	Rectal Mucosa Donor 31	rectum
38	chr14:68285800-68287000	Active TSS	Skeletal Muscle Female	skeletal muscle
39	chr14:68285800-68287000	Active TSS	HSMMtube	muscle
40	chr14:68285800-68287200	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
41	chr14:68285800-68287200	Active TSS	Brain Angular Gyrus	brain
42	chr14:68285800-68287200	Active TSS	Colon Smooth Muscle	Colon
43	chr14:68285800-68287200	Active TSS	Fetal Intestine Small	intestine
44	chr14:68285800-68287200	Active TSS	Pancreatic Islets	Pancreatic Islet
45	chr14:68285800-68287200	Active TSS	Placenta	Placenta
46	chr14:68285800-68287200	Active TSS	Left Ventricle	heart
47	chr14:68285800-68287200	Active TSS	Ovary	ovary
48	chr14:68285800-68287200	Active TSS	Pancreas	Pancrea
49	chr14:68285800-68287200	Active TSS	Right Atrium	heart
50	chr14:68285800-68287200	Active TSS	Thymus	Thymus

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