Variant report

Variant	rs7151003
Chromosome Location	chr14:70066451-70066452
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 30 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs1275745	1.00[YRI][hapmap]
rs1275746	1.00[YRI][hapmap]
rs1295826	1.00[YRI][hapmap]
rs1743379	1.00[YRI][hapmap]
rs1957369	0.85[AMR][1000 genomes]
rs1999722	1.00[YRI][hapmap]
rs2210803	1.00[YRI][hapmap]
rs2332094	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs45593332	1.00[AFR][1000 genomes]
rs4646296	1.00[AFR][1000 genomes]
rs4902745	1.00[YRI][hapmap]
rs55727771	0.85[AMR][1000 genomes]
rs55780993	0.82[ASN][1000 genomes]
rs55817110	0.94[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs55923041	0.85[AMR][1000 genomes]
rs56249045	0.94[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs56791796	0.94[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs61980684	0.85[AMR][1000 genomes]
rs61980693	0.94[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs61980724	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs61982405	1.00[AFR][1000 genomes]
rs61982438	0.82[AMR][1000 genomes]
rs61982440	0.82[AMR][1000 genomes]
rs6573900	1.00[YRI][hapmap]
rs8006991	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs945308	1.00[YRI][hapmap]
rs945309	1.00[YRI][hapmap]
rs945310	1.00[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1049280	chr14:70036804-70172630	Weak transcription Enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
2	nsv542124	chr14:70036804-70172630	Enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Genic enhancers Weak transcription Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:70043800-70067200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr14:70060400-70076600	Weak transcription	Brain Angular Gyrus	brain
3	chr14:70060800-70076800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
4	chr14:70062200-70067000	Weak transcription	Fetal Stomach	stomach
5	chr14:70065200-70070200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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