The 2.0 version of rSNPBase

Variant report

Variant rs71516829
Chromosome Location chr8:100247216-100247217
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:71 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:100204200-100248200 Weak transcription Esophagus oesophagus
2 chr8:100207000-100290400 Weak transcription Primary T helper cells fromperipheralblood blood
3 chr8:100210000-100252400 Weak transcription Primary hematopoietic stem cells blood
4 chr8:100212600-100253000 Weak transcription Lung lung
5 chr8:100214800-100252600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr8:100214800-100293200 Weak transcription Primary T cells fromperipheralblood blood
7 chr8:100215800-100248000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
8 chr8:100216800-100252200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr8:100230400-100257800 Weak transcription Aorta Aorta
10 chr8:100231000-100253000 Weak transcription Cortex derived primary cultured neurospheres brain
11 chr8:100231000-100255400 Weak transcription Right Ventricle heart
12 chr8:100231200-100253000 Weak transcription Gastric stomach
13 chr8:100231400-100251200 Weak transcription Ovary ovary
14 chr8:100232000-100247600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
15 chr8:100232000-100267400 Weak transcription Left Ventricle heart
16 chr8:100234200-100251600 Weak transcription GM12878-XiMat blood
17 chr8:100236400-100253000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr8:100236600-100252600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr8:100236800-100253000 Weak transcription Osteobl bone
20 chr8:100240000-100247800 Weak transcription Placenta Placenta
21 chr8:100240000-100249800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
22 chr8:100241200-100255400 Weak transcription Rectal Mucosa Donor 31 rectum
23 chr8:100241600-100251200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr8:100243000-100247800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
25 chr8:100243200-100253000 Weak transcription Brain Substantia Nigra brain
26 chr8:100243400-100253000 Weak transcription Brain Inferior Temporal Lobe brain
27 chr8:100243600-100247400 Weak transcription Spleen Spleen
28 chr8:100244000-100251000 Weak transcription Stomach Smooth Muscle stomach
29 chr8:100244400-100253000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr8:100244400-100253000 Weak transcription Duodenum Smooth Muscle Duodenum
31 chr8:100244600-100251600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr8:100244800-100247400 Weak transcription Duodenum Mucosa Duodenum
33 chr8:100244800-100247800 Weak transcription Primary T helper naive cells fromperipheralblood blood
34 chr8:100245000-100248200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
35 chr8:100245000-100250600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr8:100246000-100248800 Weak transcription HSMM muscle
37 chr8:100246400-100251400 Weak transcription Primary T regulatory cells fromperipheralblood blood
38 chr8:100246400-100252600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
39 chr8:100246400-100253000 Weak transcription Breast Myoepithelial Primary Cells Breast
40 chr8:100246400-100288200 Weak transcription Primary T cells from cord blood blood
41 chr8:100246600-100248200 Weak transcription Primary neutrophils fromperipheralblood blood
42 chr8:100246600-100248200 Weak transcription Fetal Muscle Trunk muscle
43 chr8:100246600-100248600 Weak transcription Adipose Nuclei Adipose
44 chr8:100246600-100250400 Weak transcription Liver Liver
45 chr8:100246600-100252200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
46 chr8:100246600-100252400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr8:100246600-100252800 Weak transcription HSMMtube muscle
48 chr8:100246600-100253000 Weak transcription Primary hematopoietic stem cells short term culture blood
49 chr8:100246600-100253000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr8:100246600-100253000 Weak transcription Dnd41 blood

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Last update: Aug 31, 2015