Variant report

Variant	rs7154681
Chromosome Location	chr14:65618705-65618706
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs12100604	1.00[EUR][1000 genomes]
rs12100674	1.00[EUR][1000 genomes]
rs17102582	1.00[EUR][1000 genomes]
rs17102614	1.00[EUR][1000 genomes]
rs28465145	1.00[EUR][1000 genomes]
rs56966413	1.00[EUR][1000 genomes]
rs59324651	1.00[EUR][1000 genomes]
rs60053410	1.00[EUR][1000 genomes]
rs60514832	1.00[EUR][1000 genomes]
rs61004469	1.00[EUR][1000 genomes]
rs7149107	1.00[AMR][1000 genomes]
rs73270852	1.00[EUR][1000 genomes]
rs73270859	1.00[EUR][1000 genomes]
rs73270874	1.00[EUR][1000 genomes]
rs8010623	1.00[EUR][1000 genomes]
rs8014977	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832816	chr14:65473244-65644645	Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	19 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:65610200-65623400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr14:65615400-65623200	Weak transcription	Gastric	stomach
3	chr14:65616400-65626200	Weak transcription	Spleen	Spleen
4	chr14:65617600-65618800	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
5	chr14:65617600-65618800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
6	chr14:65618400-65618800	Enhancers	Rectal Mucosa Donor 31	rectum
7	chr14:65618400-65618800	Flanking Active TSS	Hela-S3	cervix
8	chr14:65618400-65619600	Enhancers	Placenta	Placenta
9	chr14:65618600-65623400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
10	chr14:65618600-65623400	Weak transcription	Fetal Lung	lung

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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