Variant report

Variant	rs7158942
Chromosome Location	chr14:70607157-70607158
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:70606922..70609829-chr14:70609992..70611511,2	K562	blood:

Extended variants
information (count: 36 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs10132344	1.00[CEU][hapmap];0.91[TSI][hapmap];0.92[EUR][1000 genomes]
rs10142529	1.00[CEU][hapmap];0.89[GIH][hapmap];0.91[TSI][hapmap];0.92[EUR][1000 genomes]
rs10146074	1.00[CEU][hapmap];0.92[EUR][1000 genomes]
rs10146210	1.00[CEU][hapmap];0.90[EUR][1000 genomes]
rs10147945	0.91[EUR][1000 genomes]
rs10150046	1.00[CEU][hapmap];0.91[TSI][hapmap];0.92[EUR][1000 genomes]
rs1122706	0.95[CHB][hapmap];0.98[CHD][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs12437377	0.81[CHB][hapmap];0.95[JPT][hapmap];0.88[ASN][1000 genomes]
rs12587012	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs17107801	1.00[CEU][hapmap];0.92[EUR][1000 genomes]
rs17107818	1.00[CEU][hapmap];0.92[EUR][1000 genomes]
rs17107826	1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs17107875	1.00[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs17107916	1.00[CHB][hapmap];0.90[JPT][hapmap];0.85[ASN][1000 genomes]
rs2031855	0.81[ASN][1000 genomes]
rs2604	1.00[CEU][hapmap];0.89[GIH][hapmap];0.91[TSI][hapmap];0.92[EUR][1000 genomes]
rs2840250	0.81[CHB][hapmap];0.95[JPT][hapmap];0.82[ASN][1000 genomes]
rs4902779	0.90[JPT][hapmap];0.81[ASN][1000 genomes]
rs4902780	0.89[CHD][hapmap];0.82[JPT][hapmap]
rs4902781	0.95[CHB][hapmap];0.98[CHD][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs4902782	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs55921602	0.92[EUR][1000 genomes]
rs55967225	0.92[EUR][1000 genomes]
rs57605884	0.98[ASN][1000 genomes]
rs59651605	0.86[ASN][1000 genomes]
rs61649977	0.92[EUR][1000 genomes]
rs61662721	0.92[EUR][1000 genomes]
rs7142779	0.85[ASN][1000 genomes]
rs7157278	0.86[ASN][1000 genomes]
rs72476792	0.86[ASN][1000 genomes]
rs8006988	0.91[ASN][1000 genomes]
rs8007664	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs8019271	0.89[CHD][hapmap];0.86[JPT][hapmap];0.82[ASN][1000 genomes]
rs8020693	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[TSI][hapmap];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8022074	1.00[CHB][hapmap];0.98[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832826	chr14:70559589-70723464	Bivalent/Poised TSS Bivalent Enhancer Enhancers Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:70600400-70608200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
2	chr14:70602800-70607200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
3	chr14:70603000-70615400	Weak transcription	Skeletal Muscle Male	skeletal muscle
4	chr14:70603200-70615000	Weak transcription	Skeletal Muscle Female	skeletal muscle
5	chr14:70603600-70615400	Weak transcription	Psoas Muscle	Psoas
6	chr14:70604000-70638000	Weak transcription	HSMMtube	muscle
7	chr14:70605400-70615400	Weak transcription	Primary hematopoietic stem cells	blood

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