Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10132089	0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10136808	0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10137909	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10138176	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11623548	0.82[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs11623588	0.82[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12590831	0.82[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs17093752	0.81[ASN][1000 genomes]
rs1860104	0.84[ASN][1000 genomes]
rs1978225	0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs1978227	0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2010848	0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2190873	0.91[ASN][1000 genomes]
rs2238284	0.81[ASN][1000 genomes]
rs2283424	0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2283426	0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs2332704	0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs3825716	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4569194	0.84[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs4902964	0.83[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs7155855	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes];0.92[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530794	chr14:72113818-73034008	Enhancers Bivalent/Poised TSS Weak transcription Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:72441400-72442800	ZNF genes & repeats	Cortex derived primary cultured neurospheres	brain
2	chr14:72441600-72442800	ZNF genes & repeats	Ganglion Eminence derived primary cultured neurospheres	brain

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