The 2.0 version of rSNPBase

Variant report

Variant rs71640006
Chromosome Location chr1:211446206-211446207
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:211434400-211453200 Weak transcription Small Intestine intestine
2 chr1:211434400-211453400 Weak transcription Spleen Spleen
3 chr1:211434400-211454800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr1:211434400-211487000 Weak transcription Gastric stomach
5 chr1:211434600-211449200 Weak transcription Colonic Mucosa Colon
6 chr1:211434600-211453400 Weak transcription Aorta Aorta
7 chr1:211434600-211454000 Weak transcription Pancreas Pancrea
8 chr1:211434600-211462600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
9 chr1:211434600-211478200 Weak transcription ES-WA7 Cell Line embryonic stem cell
10 chr1:211434800-211453000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr1:211434800-211453400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
12 chr1:211434800-211462600 Weak transcription H9 Cell Line embryonic stem cell
13 chr1:211434800-211464800 Weak transcription Right Ventricle heart
14 chr1:211434800-211474200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
15 chr1:211435000-211446600 Weak transcription Stomach Mucosa stomach
16 chr1:211435600-211447800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr1:211435600-211460800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
18 chr1:211435800-211449000 Weak transcription GM12878-XiMat blood
19 chr1:211436200-211456800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr1:211437000-211454600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
21 chr1:211437200-211448000 Strong transcription Fetal Intestine Large intestine
22 chr1:211437800-211451000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr1:211438800-211478800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr1:211439800-211478200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr1:211440000-211458200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr1:211440400-211448200 Strong transcription Fetal Thymus thymus
27 chr1:211440600-211448600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
28 chr1:211440600-211449200 Weak transcription Pancreatic Islets Pancreatic Islet
29 chr1:211440600-211454400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
30 chr1:211440800-211481800 Strong transcription Monocytes-CD14+_RO01746 blood
31 chr1:211440800-211483600 Strong transcription Primary monocytes fromperipheralblood blood
32 chr1:211441000-211448800 Weak transcription Colon Smooth Muscle Colon
33 chr1:211441200-211461200 Strong transcription Primary neutrophils fromperipheralblood blood
34 chr1:211442400-211447800 Strong transcription Fetal Adrenal Gland Adrenal Gland
35 chr1:211443000-211446800 Strong transcription Fetal Muscle Leg muscle
36 chr1:211443000-211480000 Strong transcription Dnd41 blood
37 chr1:211443000-211480400 Strong transcription Placenta Placenta
38 chr1:211443200-211460800 Strong transcription Rectal Mucosa Donor 29 rectum
39 chr1:211443200-211484000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr1:211443600-211454400 Strong transcription HUES64 Cell Line embryonic stem cell
41 chr1:211443800-211447800 Strong transcription Cortex derived primary cultured neurospheres brain
42 chr1:211443800-211460400 Strong transcription Primary B cells from peripheral blood blood
43 chr1:211443800-211478200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
44 chr1:211444200-211459400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
45 chr1:211444400-211446400 Strong transcription Primary T helper cells fromperipheralblood blood
46 chr1:211444400-211446800 Strong transcription Primary T cells from cord blood blood
47 chr1:211444400-211454000 Strong transcription Skeletal Muscle Female skeletal muscle
48 chr1:211444400-211479000 Strong transcription Liver Liver
49 chr1:211444600-211446800 Strong transcription HepG2 liver
50 chr1:211444600-211447800 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin

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Last update: Aug 31, 2015