The 2.0 version of rSNPBase

Variant report

Variant rs7171251
Chromosome Location chr15:56261707-56261708
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:56229600-56282600 Weak transcription NHLF lung
2 chr15:56231400-56284200 Weak transcription Stomach Smooth Muscle stomach
3 chr15:56236200-56276000 Weak transcription HUVEC blood vessel
4 chr15:56236800-56282800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
5 chr15:56243200-56276200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
6 chr15:56248200-56285200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr15:56250000-56266600 Weak transcription Cortex derived primary cultured neurospheres brain
8 chr15:56251600-56281600 Weak transcription Osteobl bone
9 chr15:56252200-56261800 Weak transcription Spleen Spleen
10 chr15:56253400-56261800 Weak transcription HMEC breast
11 chr15:56253600-56282400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
12 chr15:56254600-56262200 Weak transcription Fetal Muscle Leg muscle
13 chr15:56255600-56261800 Weak transcription Fetal Intestine Small intestine
14 chr15:56257600-56281600 Weak transcription Fetal Intestine Large intestine
15 chr15:56257600-56283600 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr15:56257600-56283800 Weak transcription Primary T cells from cord blood blood
17 chr15:56257800-56270200 Weak transcription Aorta Aorta
18 chr15:56257800-56273800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
19 chr15:56258000-56262000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr15:56258400-56262400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
21 chr15:56258400-56262600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr15:56258400-56262600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr15:56258400-56263800 Weak transcription Fetal Adrenal Gland Adrenal Gland
24 chr15:56258400-56265000 Weak transcription Primary hematopoietic stem cells blood
25 chr15:56260800-56262600 Enhancers A549 lung
26 chr15:56261000-56262800 Enhancers Breast Myoepithelial Primary Cells Breast
27 chr15:56261000-56262800 Enhancers HepG2 liver
28 chr15:56261200-56261800 Enhancers Esophagus oesophagus
29 chr15:56261200-56262000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr15:56261200-56262400 Enhancers Skeletal Muscle Female skeletal muscle
31 chr15:56261200-56262800 Enhancers Lung lung
32 chr15:56261200-56263000 Enhancers Primary neutrophils fromperipheralblood blood
33 chr15:56261400-56262000 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr15:56261400-56262000 ZNF genes & repeats Fetal Stomach stomach
35 chr15:56261400-56262200 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
36 chr15:56261400-56262400 Enhancers HSMMtube muscle
37 chr15:56261400-56262800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
38 chr15:56261400-56262800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr15:56261400-56262800 Enhancers NHEK skin
40 chr15:56261600-56262600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
41 chr15:56261600-56262800 Enhancers Placenta Placenta

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Last update: Aug 31, 2015