The 2.0 version of rSNPBase

Variant report

Variant rs717913
Chromosome Location chr1:94241956-94241957
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:35 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:94220000-94254200 Weak transcription Aorta Aorta
2 chr1:94235600-94245200 Weak transcription H9 Cell Line embryonic stem cell
3 chr1:94235600-94245200 Weak transcription HUES48 Cell Line embryonic stem cell
4 chr1:94235800-94245200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr1:94235800-94245200 Weak transcription iPS-15b Cell Line embryonic stem cell
6 chr1:94236000-94244600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
7 chr1:94236000-94245400 Weak transcription H1 Cell Line embryonic stem cell
8 chr1:94236000-94245400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
9 chr1:94236200-94247400 Weak transcription Fetal Intestine Small intestine
10 chr1:94239400-94242800 Enhancers Breast Myoepithelial Primary Cells Breast
11 chr1:94239400-94245200 Weak transcription Psoas Muscle Psoas
12 chr1:94239600-94242200 Weak transcription HepG2 liver
13 chr1:94240600-94243000 Enhancers A549 lung
14 chr1:94240800-94244600 Weak transcription Muscle Satellite Cultured Cells --
15 chr1:94240800-94245000 Weak transcription Osteobl bone
16 chr1:94241000-94242400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr1:94241000-94242800 Enhancers ES-I3 Cell Line embryonic stem cell
18 chr1:94241000-94243000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
19 chr1:94241000-94243000 Enhancers NHEK skin
20 chr1:94241000-94243600 Weak transcription ES-WA7 Cell Line embryonic stem cell
21 chr1:94241000-94243600 Weak transcription Placenta Placenta
22 chr1:94241000-94244600 Weak transcription NH-A brain
23 chr1:94241000-94244800 Weak transcription HSMM muscle
24 chr1:94241000-94245200 Weak transcription Skeletal Muscle Male skeletal muscle
25 chr1:94241000-94245400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr1:94241000-94245400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr1:94241000-94247400 Enhancers HMEC breast
28 chr1:94241000-94249000 Enhancers Hela-S3 cervix
29 chr1:94241200-94245000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
30 chr1:94241200-94245000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr1:94241200-94248400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr1:94241600-94242400 Enhancers Cortex derived primary cultured neurospheres brain
33 chr1:94241600-94242800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr1:94241800-94242200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
35 chr1:94241800-94244800 Weak transcription HUES6 Cell Line embryonic stem cell

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Last update: Aug 31, 2015