Variant report

Variant	rs7208176
Chromosome Location	chr17:63443404-63443405
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs56146103	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs56323090	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs58768287	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59720903	0.93[ASN][1000 genomes]
rs7215910	1.00[EUR][1000 genomes]
rs73342069	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs73342074	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs73342091	1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1056195	chr17:63439524-63512389	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:63435400-63444400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr17:63441800-63443800	Enhancers	Lung	lung
3	chr17:63442400-63443800	Enhancers	Adipose Nuclei	Adipose
4	chr17:63442400-63443800	Enhancers	Right Ventricle	heart
5	chr17:63442400-63444000	Enhancers	Left Ventricle	heart
6	chr17:63442400-63444000	Enhancers	Right Atrium	heart
7	chr17:63442800-63443800	Bivalent Enhancer	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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