Variant report

Variant	rs7219534
Chromosome Location	chr17:63437097-63437098
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs59720903	1.00[EUR][1000 genomes]
rs60028782	1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs60529904	1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs60799116	1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7213593	1.00[EUR][1000 genomes]
rs7215910	0.92[ASN][1000 genomes]
rs73339859	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73339861	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73339873	1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs73339874	1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs73339881	0.92[ASN][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr17:63430600-63437200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr17:63435000-63441800	Weak transcription	Lung	lung
3	chr17:63435400-63437200	Weak transcription	HUES6 Cell Line	embryonic stem cell
4	chr17:63435400-63438400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr17:63435400-63439400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
6	chr17:63435400-63444400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
7	chr17:63435600-63437200	Weak transcription	NHDF-Ad	bronchial
8	chr17:63435600-63437600	Enhancers	HepG2	liver
9	chr17:63436800-63438800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
10	chr17:63437000-63438000	Enhancers	ES-I3 Cell Line	embryonic stem cell

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links