Variant report

Variant rs7222389
Chromosome Location chr17:43501442-43501443
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:43482400-43501600 Weak transcription HMEC breast
2 chr17:43484400-43502600 Weak transcription Fetal Lung lung
3 chr17:43484600-43502200 Weak transcription Breast Myoepithelial Primary Cells Breast
4 chr17:43488800-43505400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
5 chr17:43489600-43505400 Weak transcription Brain Hippocampus Middle brain
6 chr17:43490200-43503000 Weak transcription Adipose Nuclei Adipose
7 chr17:43490200-43505600 Weak transcription Thymus Thymus
8 chr17:43490600-43501800 Weak transcription Small Intestine intestine
9 chr17:43493000-43501600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
10 chr17:43493200-43503800 Weak transcription Spleen Spleen
11 chr17:43495800-43501800 Strong transcription Monocytes-CD14+_RO01746 blood
12 chr17:43496400-43502200 Weak transcription NHEK skin
13 chr17:43496600-43502200 Weak transcription Stomach Mucosa stomach
14 chr17:43496600-43505800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
15 chr17:43497200-43502600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
16 chr17:43497600-43501600 Weak transcription Fetal Heart heart
17 chr17:43499800-43502600 Weak transcription Primary neutrophils fromperipheralblood blood
18 chr17:43500600-43503000 Active TSS Rectal Mucosa Donor 29 rectum
19 chr17:43500800-43501800 Active TSS Esophagus oesophagus
20 chr17:43500800-43502000 Flanking Active TSS Hela-S3 cervix
21 chr17:43500800-43502200 Transcr. at gene 5' and 3' Fetal Intestine Small intestine
22 chr17:43500800-43503000 Active TSS Duodenum Mucosa Duodenum
23 chr17:43501000-43501600 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr17:43501000-43502400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr17:43501000-43503000 Active TSS Duodenum Smooth Muscle Duodenum
26 chr17:43501000-43503000 Active TSS Rectal Smooth Muscle rectum
27 chr17:43501000-43503600 Active TSS Colonic Mucosa Colon
28 chr17:43501200-43501600 Flanking Active TSS A549 lung
29 chr17:43501200-43502000 Flanking Active TSS HepG2 liver
30 chr17:43501200-43502200 Enhancers ES-I3 Cell Line embryonic stem cell
31 chr17:43501200-43502400 Enhancers HUES48 Cell Line embryonic stem cell
32 chr17:43501200-43502600 Enhancers Primary hematopoietic stem cells short term culture blood
33 chr17:43501200-43502600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr17:43501200-43503000 Active TSS Fetal Intestine Large intestine
35 chr17:43501200-43503000 Active TSS Rectal Mucosa Donor 31 rectum
36 chr17:43501400-43501600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr17:43501400-43501600 Enhancers Placenta Placenta
38 chr17:43501400-43501600 Flanking Active TSS Left Ventricle heart
39 chr17:43501400-43501600 Flanking Active TSS Right Atrium heart
40 chr17:43501400-43501600 Weak transcription Skeletal Muscle Male skeletal muscle
41 chr17:43501400-43501800 Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr17:43501400-43501800 Enhancers HUES6 Cell Line embryonic stem cell
43 chr17:43501400-43501800 Enhancers Right Ventricle heart
44 chr17:43501400-43502200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
45 chr17:43501400-43502200 Bivalent Enhancer Fetal Muscle Trunk muscle
46 chr17:43501400-43502200 Active TSS Fetal Stomach stomach
47 chr17:43501400-43502200 Enhancers Gastric stomach
48 chr17:43501400-43502200 Enhancers Lung lung
49 chr17:43501400-43502400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
50 chr17:43501400-43502600 Enhancers H1 Cell Line embryonic stem cell

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