Variant report

Variant	rs7235178
Chromosome Location	chr18:30382222-30382223
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs11872801	1.00[EUR][1000 genomes]
rs1403758	0.98[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1539816	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs16964121	1.00[EUR][1000 genomes]
rs1893244	0.84[AFR][1000 genomes]
rs1941256	0.86[AFR][1000 genomes]
rs73955287	1.00[EUR][1000 genomes]
rs9675424	0.84[AFR][1000 genomes]
rs9966457	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:30379800-30383000	Enhancers	HepG2	liver
2	chr18:30380400-30385000	Enhancers	Primary B cells from peripheral blood	blood
3	chr18:30380600-30385200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr18:30380800-30383200	Enhancers	Fetal Kidney	kidney
5	chr18:30381000-30384400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
6	chr18:30381000-30384800	Enhancers	Primary B cells from cord blood	blood
7	chr18:30381800-30382800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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