The 2.0 version of rSNPBase

Variant report

Variant rs72470571
Chromosome Location chr1:220960188-220960189
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:220939000-220960400 Weak transcription Small Intestine intestine
2 chr1:220959000-220960200 Flanking Active TSS Primary neutrophils fromperipheralblood blood
3 chr1:220959000-220962000 Flanking Active TSS Adipose Nuclei Adipose
4 chr1:220959200-220960200 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr1:220959200-220962600 Enhancers Fetal Brain Male brain
6 chr1:220959400-220960200 Flanking Active TSS Duodenum Mucosa Duodenum
7 chr1:220959400-220960200 Flanking Active TSS Fetal Adrenal Gland Adrenal Gland
8 chr1:220959400-220960200 Flanking Active TSS Fetal Intestine Large intestine
9 chr1:220959400-220960400 Bivalent Enhancer Primary T helper cells fromperipheralblood blood
10 chr1:220959400-220960600 Flanking Active TSS iPS DF 19.11 Cell Line embryonic stem cell
11 chr1:220959400-220960800 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
12 chr1:220959400-220960800 Flanking Active TSS Primary hematopoietic stem cells blood
13 chr1:220959400-220961000 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr1:220959400-220961000 Bivalent Enhancer Primary B cells from peripheral blood blood
15 chr1:220959400-220961000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
16 chr1:220959400-220961000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr1:220959400-220961000 Flanking Active TSS Cortex derived primary cultured neurospheres brain
18 chr1:220959400-220961000 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
19 chr1:220959400-220961200 Active TSS Brain Anterior Caudate brain
20 chr1:220959400-220961400 Active TSS ES-I3 Cell Line embryonic stem cell
21 chr1:220959400-220961800 Active TSS HUES64 Cell Line embryonic stem cell
22 chr1:220959600-220960200 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
23 chr1:220959600-220960200 Flanking Bivalent TSS/Enh Fetal Muscle Trunk muscle
24 chr1:220959600-220960200 Flanking Active TSS Placenta Amnion Placenta Amnion
25 chr1:220959600-220960200 Bivalent/Poised TSS Thymus Thymus
26 chr1:220959600-220960600 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr1:220959600-220960600 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
28 chr1:220959600-220960800 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr1:220959600-220960800 Flanking Active TSS Muscle Satellite Cultured Cells --
30 chr1:220959600-220960800 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
31 chr1:220959600-220960800 Active TSS Brain Inferior Temporal Lobe brain
32 chr1:220959600-220960800 Active TSS Psoas Muscle Psoas
33 chr1:220959600-220960800 Active TSS A549 lung
34 chr1:220959600-220960800 Active TSS HSMM muscle
35 chr1:220959600-220961000 Active TSS ES-WA7 Cell Line embryonic stem cell
36 chr1:220959600-220961000 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
37 chr1:220959600-220961000 Flanking Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
38 chr1:220959600-220961000 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
39 chr1:220959600-220961000 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr1:220959600-220961000 Bivalent/Poised TSS Primary mononuclear cells fromperipheralblood Blood
41 chr1:220959600-220961000 Active TSS Aorta Aorta
42 chr1:220959600-220961000 Flanking Active TSS Ovary ovary
43 chr1:220959600-220961200 Active TSS H9 Cell Line embryonic stem cell
44 chr1:220959600-220961200 Active TSS HUES48 Cell Line embryonic stem cell
45 chr1:220959600-220961200 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr1:220959600-220961200 Active TSS Pancreatic Islets Pancreatic Islet
47 chr1:220959600-220961400 Active TSS HUES6 Cell Line embryonic stem cell
48 chr1:220959600-220961400 Active TSS iPS-15b Cell Line embryonic stem cell
49 chr1:220959600-220961400 Active TSS iPS-18 Cell Line embryonic stem cell
50 chr1:220959600-220961400 Active TSS iPS-20b Cell Line embryonic stem cell

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015