The 2.0 version of rSNPBase

Variant report

Variant rs72470575
Chromosome Location chr1:220960667-220960668
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:111 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:220959000-220962000 Flanking Active TSS Adipose Nuclei Adipose
2 chr1:220959200-220962600 Enhancers Fetal Brain Male brain
3 chr1:220959400-220960800 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
4 chr1:220959400-220960800 Flanking Active TSS Primary hematopoietic stem cells blood
5 chr1:220959400-220961000 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr1:220959400-220961000 Bivalent Enhancer Primary B cells from peripheral blood blood
7 chr1:220959400-220961000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
8 chr1:220959400-220961000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
9 chr1:220959400-220961000 Flanking Active TSS Cortex derived primary cultured neurospheres brain
10 chr1:220959400-220961000 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
11 chr1:220959400-220961200 Active TSS Brain Anterior Caudate brain
12 chr1:220959400-220961400 Active TSS ES-I3 Cell Line embryonic stem cell
13 chr1:220959400-220961800 Active TSS HUES64 Cell Line embryonic stem cell
14 chr1:220959600-220960800 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
15 chr1:220959600-220960800 Flanking Active TSS Muscle Satellite Cultured Cells --
16 chr1:220959600-220960800 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
17 chr1:220959600-220960800 Active TSS Brain Inferior Temporal Lobe brain
18 chr1:220959600-220960800 Active TSS Psoas Muscle Psoas
19 chr1:220959600-220960800 Active TSS A549 lung
20 chr1:220959600-220960800 Active TSS HSMM muscle
21 chr1:220959600-220961000 Active TSS ES-WA7 Cell Line embryonic stem cell
22 chr1:220959600-220961000 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
23 chr1:220959600-220961000 Flanking Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr1:220959600-220961000 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
25 chr1:220959600-220961000 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr1:220959600-220961000 Bivalent/Poised TSS Primary mononuclear cells fromperipheralblood Blood
27 chr1:220959600-220961000 Active TSS Aorta Aorta
28 chr1:220959600-220961000 Flanking Active TSS Ovary ovary
29 chr1:220959600-220961200 Active TSS H9 Cell Line embryonic stem cell
30 chr1:220959600-220961200 Active TSS HUES48 Cell Line embryonic stem cell
31 chr1:220959600-220961200 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr1:220959600-220961200 Active TSS Pancreatic Islets Pancreatic Islet
33 chr1:220959600-220961400 Active TSS HUES6 Cell Line embryonic stem cell
34 chr1:220959600-220961400 Active TSS iPS-15b Cell Line embryonic stem cell
35 chr1:220959600-220961400 Active TSS iPS-18 Cell Line embryonic stem cell
36 chr1:220959600-220961400 Active TSS iPS-20b Cell Line embryonic stem cell
37 chr1:220959600-220961400 Active TSS Brain Angular Gyrus brain
38 chr1:220959600-220961400 Active TSS Duodenum Smooth Muscle Duodenum
39 chr1:220959600-220961600 Active TSS HepG2 liver
40 chr1:220959600-220961800 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr1:220959800-220960800 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr1:220959800-220960800 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
43 chr1:220959800-220960800 Flanking Active TSS HUVEC blood vessel
44 chr1:220959800-220960800 Active TSS NHDF-Ad bronchial
45 chr1:220959800-220961000 Active TSS Brain Cingulate Gyrus brain
46 chr1:220959800-220961000 Active TSS Brain Substantia Nigra brain
47 chr1:220959800-220961000 Active TSS Fetal Kidney kidney
48 chr1:220959800-220961000 Active TSS Gastric stomach
49 chr1:220959800-220961000 Active TSS Pancreas Pancrea
50 chr1:220959800-220961000 Active TSS Right Atrium heart

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Last update: Aug 31, 2015