The 2.0 version of rSNPBase

Variant report

Variant rs72470600
Chromosome Location chr1:220971263-220971264
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:220961000-220973400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:220961000-220976800 Weak transcription Ovary ovary
3 chr1:220961000-220978200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr1:220961000-220982200 Weak transcription Brain Substantia Nigra brain
5 chr1:220961400-220983800 Weak transcription Esophagus oesophagus
6 chr1:220961600-220975000 Weak transcription Brain Angular Gyrus brain
7 chr1:220961600-220975200 Weak transcription Brain Cingulate Gyrus brain
8 chr1:220961600-220983600 Weak transcription Pancreas Pancrea
9 chr1:220961800-220971600 Weak transcription Brain Germinal Matrix brain
10 chr1:220961800-220972000 Weak transcription Rectal Smooth Muscle rectum
11 chr1:220961800-220974200 Weak transcription iPS-15b Cell Line embryonic stem cell
12 chr1:220961800-220979800 Weak transcription Right Atrium heart
13 chr1:220961800-220981400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
14 chr1:220961800-220981600 Weak transcription Fetal Muscle Trunk muscle
15 chr1:220961800-220983800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr1:220962000-220975000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr1:220964000-220974000 Weak transcription H9 Cell Line embryonic stem cell
18 chr1:220964800-220972000 Weak transcription Cortex derived primary cultured neurospheres brain
19 chr1:220964800-220978400 Weak transcription Primary B cells from cord blood blood
20 chr1:220965000-220972600 Weak transcription Colonic Mucosa Colon
21 chr1:220965000-220972600 Weak transcription Rectal Mucosa Donor 29 rectum
22 chr1:220965000-220980000 Weak transcription Fetal Muscle Leg muscle
23 chr1:220965200-220971600 Weak transcription Right Ventricle heart
24 chr1:220965200-220979600 Weak transcription Gastric stomach
25 chr1:220965200-220985400 Weak transcription Aorta Aorta
26 chr1:220965400-220971600 Weak transcription Left Ventricle heart
27 chr1:220965400-220972400 Weak transcription Brain Anterior Caudate brain
28 chr1:220965400-220982200 Weak transcription Brain Inferior Temporal Lobe brain
29 chr1:220965600-220983600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr1:220965800-220971800 Weak transcription Skeletal Muscle Male skeletal muscle
31 chr1:220965800-220983800 Weak transcription Fetal Lung lung
32 chr1:220966400-220996000 Strong transcription Monocytes-CD14+_RO01746 blood
33 chr1:220966600-220982400 Strong transcription Primary monocytes fromperipheralblood blood
34 chr1:220966800-220985200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
35 chr1:220967600-220976400 Strong transcription Adipose Nuclei Adipose
36 chr1:220967600-220983800 Weak transcription Psoas Muscle Psoas
37 chr1:220968200-220977200 Strong transcription Primary neutrophils fromperipheralblood blood
38 chr1:220968800-220971600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
39 chr1:220969600-220971600 Enhancers Fetal Heart heart
40 chr1:220969600-220972200 Strong transcription Hela-S3 cervix
41 chr1:220969600-220975600 Strong transcription HUES48 Cell Line embryonic stem cell
42 chr1:220969600-220978800 Strong transcription HepG2 liver
43 chr1:220969800-220972800 Strong transcription iPS-18 Cell Line embryonic stem cell
44 chr1:220969800-220974200 Strong transcription HUES64 Cell Line embryonic stem cell
45 chr1:220969800-220976400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
46 chr1:220969800-220976600 Strong transcription iPS-20b Cell Line embryonic stem cell
47 chr1:220970000-220972000 Genic enhancers Skeletal Muscle Female skeletal muscle
48 chr1:220970000-220975600 Strong transcription Breast Myoepithelial Primary Cells Breast
49 chr1:220970000-220975600 Strong transcription Fetal Intestine Large intestine
50 chr1:220970000-220976000 Strong transcription Fetal Stomach stomach

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Last update: Aug 31, 2015