The 2.0 version of rSNPBase

Variant report

Variant rs72472356
Chromosome Location chr1:220984942-220984943
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:67 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:220965200-220985400 Weak transcription Aorta Aorta
2 chr1:220966400-220996000 Strong transcription Monocytes-CD14+_RO01746 blood
3 chr1:220966800-220985200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
4 chr1:220970400-220985800 Weak transcription Duodenum Mucosa Duodenum
5 chr1:220971200-220986400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
6 chr1:220971200-220991400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
7 chr1:220972800-220987600 Weak transcription Fetal Brain Male brain
8 chr1:220973200-220991800 Weak transcription Brain Anterior Caudate brain
9 chr1:220973400-221000200 Weak transcription Placenta Placenta
10 chr1:220974000-220992800 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr1:220974200-220986800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr1:220974200-220991200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
13 chr1:220975200-220992000 Weak transcription Brain Germinal Matrix brain
14 chr1:220975600-220988000 Weak transcription Brain Angular Gyrus brain
15 chr1:220975600-220991400 Weak transcription Brain Cingulate Gyrus brain
16 chr1:220976400-220988000 Weak transcription Spleen Spleen
17 chr1:220978400-220991200 Weak transcription iPS-15b Cell Line embryonic stem cell
18 chr1:220979400-220989400 Strong transcription Primary neutrophils fromperipheralblood blood
19 chr1:220979800-220985200 Weak transcription Cortex derived primary cultured neurospheres brain
20 chr1:220980000-220985200 Weak transcription H9 Cell Line embryonic stem cell
21 chr1:220980400-221001400 Weak transcription Gastric stomach
22 chr1:220980600-220986600 Weak transcription Fetal Brain Female brain
23 chr1:220981000-220987600 Strong transcription Hela-S3 cervix
24 chr1:220981400-220991600 Strong transcription Fetal Intestine Small intestine
25 chr1:220982400-220987200 Weak transcription Brain Substantia Nigra brain
26 chr1:220982600-220985400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr1:220983800-220985400 Enhancers HUVEC blood vessel
28 chr1:220984000-220985000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
29 chr1:220984000-220985200 Weak transcription HUES48 Cell Line embryonic stem cell
30 chr1:220984000-220985200 Weak transcription HUES64 Cell Line embryonic stem cell
31 chr1:220984000-220985400 Weak transcription H1 Cell Line embryonic stem cell
32 chr1:220984000-220989400 Weak transcription Brain Inferior Temporal Lobe brain
33 chr1:220984000-220991600 Weak transcription Small Intestine intestine
34 chr1:220984000-220992200 Weak transcription Esophagus oesophagus
35 chr1:220984000-220997400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr1:220984000-220999800 Weak transcription Colonic Mucosa Colon
37 chr1:220984200-220985000 Weak transcription Fetal Intestine Large intestine
38 chr1:220984200-220985000 Enhancers Rectal Smooth Muscle rectum
39 chr1:220984200-220985800 Enhancers Duodenum Smooth Muscle Duodenum
40 chr1:220984200-220986400 Weak transcription Pancreas Pancrea
41 chr1:220984200-220986600 Weak transcription Fetal Adrenal Gland Adrenal Gland
42 chr1:220984200-220987600 Strong transcription HepG2 liver
43 chr1:220984200-220988400 Weak transcription Fetal Lung lung
44 chr1:220984200-220989400 Weak transcription Rectal Mucosa Donor 29 rectum
45 chr1:220984200-220990400 Strong transcription Adipose Nuclei Adipose
46 chr1:220984200-220991400 Weak transcription ES-I3 Cell Line embryonic stem cell
47 chr1:220984200-220991400 Weak transcription HUES6 Cell Line embryonic stem cell
48 chr1:220984200-220991400 Weak transcription iPS-18 Cell Line embryonic stem cell
49 chr1:220984200-220991600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
50 chr1:220984200-220991600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell

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Last update: Aug 31, 2015