The 2.0 version of rSNPBase

Variant report

Variant rs72472362
Chromosome Location chr1:220989091-220989092
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:220966400-220996000 Strong transcription Monocytes-CD14+_RO01746 blood
2 chr1:220971200-220991400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
3 chr1:220973200-220991800 Weak transcription Brain Anterior Caudate brain
4 chr1:220973400-221000200 Weak transcription Placenta Placenta
5 chr1:220974000-220992800 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr1:220974200-220991200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
7 chr1:220975200-220992000 Weak transcription Brain Germinal Matrix brain
8 chr1:220975600-220991400 Weak transcription Brain Cingulate Gyrus brain
9 chr1:220978400-220991200 Weak transcription iPS-15b Cell Line embryonic stem cell
10 chr1:220979400-220989400 Strong transcription Primary neutrophils fromperipheralblood blood
11 chr1:220980400-221001400 Weak transcription Gastric stomach
12 chr1:220981400-220991600 Strong transcription Fetal Intestine Small intestine
13 chr1:220984000-220989400 Weak transcription Brain Inferior Temporal Lobe brain
14 chr1:220984000-220991600 Weak transcription Small Intestine intestine
15 chr1:220984000-220992200 Weak transcription Esophagus oesophagus
16 chr1:220984000-220997400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr1:220984000-220999800 Weak transcription Colonic Mucosa Colon
18 chr1:220984200-220989400 Weak transcription Rectal Mucosa Donor 29 rectum
19 chr1:220984200-220990400 Strong transcription Adipose Nuclei Adipose
20 chr1:220984200-220991400 Weak transcription ES-I3 Cell Line embryonic stem cell
21 chr1:220984200-220991400 Weak transcription HUES6 Cell Line embryonic stem cell
22 chr1:220984200-220991400 Weak transcription iPS-18 Cell Line embryonic stem cell
23 chr1:220984200-220991600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
24 chr1:220984200-220991600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
25 chr1:220984200-220991800 Weak transcription Rectal Mucosa Donor 31 rectum
26 chr1:220984200-220992000 Weak transcription Fetal Muscle Trunk muscle
27 chr1:220984200-220992200 Weak transcription Lung lung
28 chr1:220984200-220992400 Weak transcription ES-WA7 Cell Line embryonic stem cell
29 chr1:220984200-220993400 Strong transcription Primary monocytes fromperipheralblood blood
30 chr1:220984200-221001400 Weak transcription Skeletal Muscle Male skeletal muscle
31 chr1:220984600-220989600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr1:220984600-220999600 Weak transcription Left Ventricle heart
33 chr1:220984600-221006600 Weak transcription Psoas Muscle Psoas
34 chr1:220984800-220991600 Weak transcription Skeletal Muscle Female skeletal muscle
35 chr1:220984800-220993000 Weak transcription Right Ventricle heart
36 chr1:220985000-220991800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr1:220985400-220990200 Strong transcription Aorta Aorta
38 chr1:220986000-220990200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
39 chr1:220986000-220991600 Weak transcription H9 Cell Line embryonic stem cell
40 chr1:220986400-220990400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
41 chr1:220986800-220991800 Weak transcription H1 Cell Line embryonic stem cell
42 chr1:220986800-220992800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
43 chr1:220987200-220990000 Weak transcription Duodenum Mucosa Duodenum
44 chr1:220987200-220990600 Enhancers Rectal Smooth Muscle rectum
45 chr1:220987200-220991600 Weak transcription HUES64 Cell Line embryonic stem cell
46 chr1:220987400-220989200 Weak transcription iPS-20b Cell Line embryonic stem cell
47 chr1:220987400-220990000 Enhancers Colon Smooth Muscle Colon
48 chr1:220987400-220997000 Weak transcription Fetal Adrenal Gland Adrenal Gland
49 chr1:220987600-220990400 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
50 chr1:220987600-221003800 Weak transcription HepG2 liver

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015