The 2.0 version of rSNPBase

Variant report

Variant rs72636562
Chromosome Location chr13:96562767-96562768
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:96478000-96568400 Weak transcription Placenta Placenta
2 chr13:96495000-96590800 Weak transcription Rectal Smooth Muscle rectum
3 chr13:96503000-96567400 Weak transcription NHEK skin
4 chr13:96503400-96580800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr13:96503600-96562800 Weak transcription Fetal Brain Female brain
6 chr13:96523200-96581800 Weak transcription Monocytes-CD14+_RO01746 blood
7 chr13:96536200-96587200 Weak transcription Stomach Smooth Muscle stomach
8 chr13:96542400-96576800 Weak transcription HSMMtube muscle
9 chr13:96542400-96581600 Weak transcription Rectal Mucosa Donor 31 rectum
10 chr13:96543000-96581600 Weak transcription Fetal Lung lung
11 chr13:96543000-96581800 Weak transcription Brain Inferior Temporal Lobe brain
12 chr13:96543000-96586800 Weak transcription Brain Hippocampus Middle brain
13 chr13:96543400-96576600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr13:96544600-96576800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr13:96549000-96563200 Weak transcription Stomach Mucosa stomach
16 chr13:96549400-96586400 Weak transcription Hela-S3 cervix
17 chr13:96553200-96573600 Weak transcription Osteobl bone
18 chr13:96556400-96563000 Weak transcription Fetal Heart heart
19 chr13:96558400-96567200 Weak transcription Fetal Kidney kidney
20 chr13:96558400-96586600 Weak transcription Right Ventricle heart
21 chr13:96558600-96579000 Weak transcription Pancreatic Islets Pancreatic Islet
22 chr13:96559400-96565800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr13:96559400-96566200 Weak transcription HUES64 Cell Line embryonic stem cell
24 chr13:96559400-96568400 Weak transcription Liver Liver
25 chr13:96559400-96569400 Weak transcription Sigmoid Colon Sigmoid Colon
26 chr13:96559600-96566200 Weak transcription Fetal Intestine Small intestine
27 chr13:96559600-96567800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr13:96559600-96576600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
29 chr13:96559600-96576800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr13:96559600-96580800 Weak transcription HUES6 Cell Line embryonic stem cell
31 chr13:96559600-96583000 Weak transcription Pancreas Pancrea
32 chr13:96559600-96586400 Weak transcription A549 lung
33 chr13:96559800-96566800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
34 chr13:96559800-96567800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
35 chr13:96559800-96567800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
36 chr13:96559800-96568000 Weak transcription Aorta Aorta
37 chr13:96559800-96580600 Weak transcription H1 Cell Line embryonic stem cell
38 chr13:96559800-96580600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
39 chr13:96559800-96583400 Weak transcription Esophagus oesophagus
40 chr13:96559800-96588600 Weak transcription Gastric stomach
41 chr13:96560000-96567400 Weak transcription Duodenum Smooth Muscle Duodenum
42 chr13:96560000-96567800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
43 chr13:96560000-96567800 Weak transcription Fetal Muscle Trunk muscle
44 chr13:96560000-96567800 Weak transcription Left Ventricle heart
45 chr13:96560000-96567800 Weak transcription Lung lung
46 chr13:96560000-96567800 Weak transcription Ovary ovary
47 chr13:96560000-96568000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
48 chr13:96560000-96572000 Weak transcription Skeletal Muscle Male skeletal muscle
49 chr13:96560000-96581400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
50 chr13:96560000-96581600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015