Variant report

Variant	rs72640596
Chromosome Location	chr8:49884725-49884726
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs10504069	0.81[EUR][1000 genomes]
rs12674652	0.83[AFR][1000 genomes]
rs13279209	0.83[AFR][1000 genomes];0.95[EUR][1000 genomes]
rs1511364	0.83[AFR][1000 genomes];0.94[EUR][1000 genomes]
rs16922692	0.83[EUR][1000 genomes]
rs16939398	1.00[AFR][1000 genomes]
rs16939444	0.83[AFR][1000 genomes]
rs2667282	0.83[AFR][1000 genomes]
rs2891720	0.83[AFR][1000 genomes]
rs33961425	0.84[EUR][1000 genomes]
rs34381258	0.83[AFR][1000 genomes]
rs36043856	0.83[AFR][1000 genomes];0.95[EUR][1000 genomes]
rs4873311	1.00[AFR][1000 genomes]
rs9650217	1.00[AFR][1000 genomes];0.83[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1024584	chr8:49879137-49906780	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Bivalent/Poised TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:49881600-49889400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr8:49883600-49885200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links