Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs11988327	1.00[ASN][1000 genomes]
rs11995803	1.00[ASN][1000 genomes]
rs72655003	1.00[ASN][1000 genomes]
rs72655011	0.91[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72655031	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72655032	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72655033	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72655040	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72655052	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72655076	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72656520	1.00[ASN][1000 genomes]
rs72656523	1.00[ASN][1000 genomes]
rs72656530	1.00[ASN][1000 genomes]
rs72656539	1.00[ASN][1000 genomes]
rs72656545	1.00[ASN][1000 genomes]
rs72656600	1.00[ASN][1000 genomes]
rs72658335	1.00[ASN][1000 genomes]
rs72658345	1.00[ASN][1000 genomes]
rs72658355	1.00[ASN][1000 genomes]
rs72658358	1.00[ASN][1000 genomes]
rs72658363	1.00[ASN][1000 genomes]
rs72658377	1.00[ASN][1000 genomes]
rs72658378	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1018879	chr8:63281724-63937632	Enhancers Weak transcription Flanking Bivalent TSS/Enh Strong transcription Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
2	nsv831341	chr8:63658694-63852213	Enhancers Active TSS Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv1033527	chr8:63673915-64073735	Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Strong transcription Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
4	nsv890962	chr8:63708519-63812686	Active TSS Enhancers Flanking Active TSS ZNF genes & repeats Weak transcription Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:63782000-63792200	Weak transcription	Cortex derived primary cultured neurospheres	brain

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