Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs11988327	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11995803	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72655003	1.00[ASN][1000 genomes]
rs72655011	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72655020	1.00[ASN][1000 genomes]
rs72655031	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72655032	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72655033	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72655040	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72655052	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72655076	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72656523	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72656530	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72656539	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72656545	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72656600	1.00[ASN][1000 genomes]
rs72658335	1.00[ASN][1000 genomes]
rs72658345	1.00[ASN][1000 genomes]
rs72658355	1.00[ASN][1000 genomes]
rs72658358	1.00[ASN][1000 genomes]
rs72658363	1.00[ASN][1000 genomes]
rs72658377	1.00[ASN][1000 genomes]
rs72658378	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1018879	chr8:63281724-63937632	Enhancers Weak transcription Flanking Bivalent TSS/Enh Strong transcription Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
2	nsv1033527	chr8:63673915-64073735	Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Strong transcription Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
3	nsv890963	chr8:63846472-63885100	Strong transcription Enhancers Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	nsv890964	chr8:63848556-63898146	Enhancers Bivalent Enhancer Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:63858400-63859600	Enhancers	Cortex derived primary cultured neurospheres	brain
2	chr8:63858800-63859000	Bivalent Enhancer	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr8:63858800-63859000	Enhancers	Spleen	Spleen
4	chr8:63858800-63860000	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
5	chr8:63858800-63860600	Enhancers	Fetal Intestine Large	intestine
6	chr8:63858800-63860600	Enhancers	Fetal Intestine Small	intestine

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