Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs11988327	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11995803	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72655003	1.00[ASN][1000 genomes]
rs72655011	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72655020	1.00[ASN][1000 genomes]
rs72655031	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72655032	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72655033	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72655040	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72655052	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72655076	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72656520	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72656523	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72656530	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72656539	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72656600	0.87[AFR][1000 genomes];0.81[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs72658335	1.00[ASN][1000 genomes]
rs72658345	1.00[ASN][1000 genomes]
rs72658355	1.00[ASN][1000 genomes]
rs72658358	1.00[ASN][1000 genomes]
rs72658363	1.00[ASN][1000 genomes]
rs72658377	1.00[ASN][1000 genomes]
rs72658378	1.00[ASN][1000 genomes]
rs72659805	0.87[AFR][1000 genomes]
rs72659809	0.87[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1018879	chr8:63281724-63937632	Enhancers Weak transcription Flanking Bivalent TSS/Enh Strong transcription Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
2	nsv1033527	chr8:63673915-64073735	Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Strong transcription Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
3	nsv890963	chr8:63846472-63885100	Strong transcription Enhancers Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	nsv890964	chr8:63848556-63898146	Enhancers Bivalent Enhancer Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
5	nsv611447	chr8:63867493-63883593	Weak transcription Strong transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
6	nsv971315	chr8:63873161-63874923	Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:63859600-63877800	Weak transcription	Cortex derived primary cultured neurospheres	brain
2	chr8:63868600-63895800	Weak transcription	Fetal Brain Female	brain
3	chr8:63871800-63875400	Weak transcription	Placenta	Placenta

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