Variant report

Variant	rs72660230
Chromosome Location	chr14:55158914-55158915
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:19)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:19 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr14:55158722..55162150-chr14:55187455..55191163,3	K562	blood:
2	chr14:55031950..55032934-chr14:55158020..55159038,3	MCF-7	breast:
3	chr14:55158430..55158963-chr14:55239590..55240151,2	MCF-7	breast:
4	chr14:55152624..55154983-chr14:55158609..55161156,2	K562	blood:
5	chr14:55140196..55140744-chr14:55158139..55158942,2	MCF-7	breast:
6	chr14:55035490..55037978-chr14:55158318..55160767,2	K562	blood:
7	chr14:55158325..55158986-chr14:55189382..55190113,2	MCF-7	breast:
8	chr14:55125925..55127588-chr14:55158013..55160688,2	MCF-7	breast:
9	chr14:55157969..55160953-chr14:55201811..55203780,2	MCF-7	breast:
10	chr14:55140902..55144025-chr14:55156540..55160484,3	K562	blood:
11	chr14:55158003..55159901-chr14:55164880..55166832,2	K562	blood:
12	chr14:55151370..55153838-chr14:55155810..55159245,4	MCF-7	breast:
13	chr14:55030607..55031714-chr14:55158028..55159009,4	MCF-7	breast:
14	chr14:55034172..55035071-chr14:55158011..55158919,2	MCF-7	breast:
15	chr14:55030217..55037454-chr14:55155410..55162836,15	MCF-7	breast:
16	chr14:55030759..55039196-chr14:55155352..55168435,18	MCF-7	breast:
17	chr14:55158040..55161012-chr14:55176394..55179136,2	MCF-7	breast:
18	chr14:55156301..55159085-chr14:55171921..55174252,3	K562	blood:
19	chr14:55145858..55147827-chr14:55158214..55161062,2	K562	blood:

No data

Variant related genes	Relation type
ENSG00000020577	Chromatin interaction

rs_ID	r²[population]
rs10136966	1.00[AMR][1000 genomes]

Chromatin state (count:76 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:55120000-55179400	Weak transcription	Fetal Intestine Small	intestine
2	chr14:55151800-55165200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
3	chr14:55152800-55178400	Weak transcription	Duodenum Smooth Muscle	Duodenum
4	chr14:55153000-55174600	Weak transcription	Colonic Mucosa	Colon
5	chr14:55153000-55197000	Weak transcription	H9 Cell Line	embryonic stem cell
6	chr14:55153200-55161400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
7	chr14:55153600-55161400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
8	chr14:55153600-55161600	Weak transcription	NHEK	skin
9	chr14:55153800-55163000	Weak transcription	HMEC	breast
10	chr14:55154200-55161200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
11	chr14:55154200-55165000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
12	chr14:55154400-55178800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
13	chr14:55154600-55165400	Weak transcription	Placenta	Placenta
14	chr14:55154600-55178600	Weak transcription	Sigmoid Colon	Sigmoid Colon
15	chr14:55154800-55178600	Weak transcription	Muscle Satellite Cultured Cells	--
16	chr14:55155000-55159400	Enhancers	Skeletal Muscle Male	skeletal muscle
17	chr14:55155200-55165400	Enhancers	Skeletal Muscle Female	skeletal muscle
18	chr14:55155400-55179000	Weak transcription	NH-A	brain
19	chr14:55156000-55163000	Enhancers	Fetal Heart	heart
20	chr14:55156400-55159400	Enhancers	Right Atrium	heart
21	chr14:55156400-55159600	Enhancers	Left Ventricle	heart
22	chr14:55156800-55161000	Weak transcription	Aorta	Aorta
23	chr14:55157200-55159200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
24	chr14:55157200-55159400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
25	chr14:55157400-55159000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
26	chr14:55157400-55159200	Enhancers	HepG2	liver
27	chr14:55157400-55159400	Enhancers	ES-I3 Cell Line	embryonic stem cell
28	chr14:55157400-55159400	Enhancers	Rectal Smooth Muscle	rectum
29	chr14:55157400-55159600	Enhancers	Fetal Muscle Leg	muscle
30	chr14:55157600-55159000	Enhancers	NHLF	lung
31	chr14:55157600-55159200	Enhancers	HUES6 Cell Line	embryonic stem cell
32	chr14:55157600-55159400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
33	chr14:55157600-55159400	Enhancers	Spleen	Spleen
34	chr14:55157600-55159600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
35	chr14:55157600-55159600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
36	chr14:55157600-55159600	Enhancers	Primary hematopoietic stem cells short term culture	blood
37	chr14:55157800-55159000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
38	chr14:55157800-55159400	Enhancers	Fetal Muscle Trunk	muscle
39	chr14:55158000-55159000	Enhancers	HUES48 Cell Line	embryonic stem cell
40	chr14:55158000-55159000	Enhancers	Brain Substantia Nigra	brain
41	chr14:55158000-55159200	Enhancers	Brain Cingulate Gyrus	brain
42	chr14:55158000-55159400	Enhancers	Primary monocytes fromperipheralblood	blood
43	chr14:55158000-55159400	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
44	chr14:55158000-55159400	Enhancers	Brain Anterior Caudate	brain
45	chr14:55158000-55159400	Enhancers	K562	blood
46	chr14:55158000-55159400	Enhancers	NHDF-Ad	bronchial
47	chr14:55158000-55159800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
48	chr14:55158000-55165400	Weak transcription	Lung	lung
49	chr14:55158000-55168800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
50	chr14:55158200-55159400	Enhancers	Adipose Nuclei	Adipose

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