Variant report

Variant	rs72664091
Chromosome Location	chr8:63009737-63009738
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs16918904	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs16918906	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs16928235	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs16928320	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs16928330	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs60162910	0.81[AMR][1000 genomes]
rs60322521	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs72662689	0.93[AMR][1000 genomes]
rs72664004	0.93[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72664043	0.93[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs72664051	0.97[EUR][1000 genomes]
rs72664097	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs72666305	0.93[AMR][1000 genomes]
rs72666306	0.82[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv890954	chr8:62919691-63023132	Enhancers Flanking Active TSS Active TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv890955	chr8:62919691-63062581	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv1032321	chr8:62954064-63026567	Enhancers Weak transcription ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:63009600-63013600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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