The 2.0 version of rSNPBase

Variant report

Variant rs72665772
Chromosome Location chr4:87521087-87521088
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:87517000-87536600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr4:87517200-87529800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
3 chr4:87517600-87521600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr4:87518600-87526000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr4:87518800-87522000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
6 chr4:87519000-87521200 Weak transcription Fetal Kidney kidney
7 chr4:87519000-87523000 Weak transcription Breast Myoepithelial Primary Cells Breast
8 chr4:87519000-87523000 Weak transcription Brain Inferior Temporal Lobe brain
9 chr4:87519000-87524000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
10 chr4:87519000-87524200 Enhancers Primary T helper 17 cells PMA-I stimulated --
11 chr4:87519000-87525600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
12 chr4:87519000-87526000 Weak transcription HUES6 Cell Line embryonic stem cell
13 chr4:87519000-87529200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
14 chr4:87519000-87530000 Weak transcription Osteobl bone
15 chr4:87519200-87521200 Weak transcription NHDF-Ad bronchial
16 chr4:87519200-87521600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
17 chr4:87519200-87522800 Weak transcription Brain Substantia Nigra brain
18 chr4:87519200-87523000 Weak transcription Pancreatic Islets Pancreatic Islet
19 chr4:87519200-87523000 Weak transcription HMEC breast
20 chr4:87519200-87525600 Enhancers NHEK skin
21 chr4:87519400-87529600 Weak transcription Cortex derived primary cultured neurospheres brain
22 chr4:87519600-87521200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr4:87519600-87526000 Weak transcription Fetal Lung lung
24 chr4:87519600-87529800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
25 chr4:87520000-87522800 Weak transcription Brain Cingulate Gyrus brain
26 chr4:87520200-87523000 Weak transcription Brain Hippocampus Middle brain
27 chr4:87520200-87524200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr4:87520200-87528600 Weak transcription Ovary ovary
29 chr4:87520400-87521400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr4:87520800-87521800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr4:87520800-87522000 Enhancers HUES64 Cell Line embryonic stem cell
32 chr4:87521000-87521200 Enhancers HUES48 Cell Line embryonic stem cell
33 chr4:87521000-87521200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
34 chr4:87521000-87521200 Enhancers Fetal Intestine Large intestine
35 chr4:87521000-87521400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr4:87521000-87521400 Enhancers iPS-18 Cell Line embryonic stem cell
37 chr4:87521000-87521400 Enhancers Primary hematopoietic stem cells short term culture blood
38 chr4:87521000-87521400 Enhancers A549 lung
39 chr4:87521000-87521600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
40 chr4:87521000-87521600 Enhancers Brain Anterior Caudate brain
41 chr4:87521000-87521800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived

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Last update: Aug 31, 2015