The 2.0 version of rSNPBase

Variant report

Variant rs72716472
Chromosome Location chr1:92341191-92341192
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:60 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:92317400-92344400 Weak transcription Fetal Intestine Large intestine
2 chr1:92332400-92342400 Enhancers Primary T cells fromperipheralblood blood
3 chr1:92335200-92343400 Enhancers Primary Natural Killer cells fromperipheralblood blood
4 chr1:92337400-92341200 Enhancers Ovary ovary
5 chr1:92338200-92342000 Weak transcription Fetal Lung lung
6 chr1:92338200-92342000 Weak transcription Skeletal Muscle Female skeletal muscle
7 chr1:92338400-92341600 Weak transcription Fetal Muscle Leg muscle
8 chr1:92338400-92341800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
9 chr1:92338400-92342000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
10 chr1:92338400-92342200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
11 chr1:92338400-92343800 Weak transcription Fetal Kidney kidney
12 chr1:92338400-92348600 Weak transcription Right Atrium heart
13 chr1:92338600-92341600 Weak transcription Rectal Mucosa Donor 31 rectum
14 chr1:92338600-92341800 Weak transcription Osteobl bone
15 chr1:92338600-92343200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
16 chr1:92338600-92343400 Weak transcription Rectal Smooth Muscle rectum
17 chr1:92338600-92344400 Weak transcription Fetal Intestine Small intestine
18 chr1:92338600-92347200 Weak transcription Psoas Muscle Psoas
19 chr1:92338600-92348800 Weak transcription Stomach Mucosa stomach
20 chr1:92338600-92349600 Weak transcription Pancreas Pancrea
21 chr1:92338600-92350000 Weak transcription Esophagus oesophagus
22 chr1:92338600-92350000 Weak transcription Left Ventricle heart
23 chr1:92338800-92341600 Weak transcription Primary T regulatory cells fromperipheralblood blood
24 chr1:92338800-92341600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
25 chr1:92338800-92341600 Weak transcription Primary T killer memory cells from peripheral blood blood
26 chr1:92338800-92341600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
27 chr1:92338800-92341600 Weak transcription NHLF lung
28 chr1:92338800-92341800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
29 chr1:92338800-92341800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr1:92338800-92341800 Weak transcription Fetal Stomach stomach
31 chr1:92338800-92341800 Weak transcription NHDF-Ad bronchial
32 chr1:92338800-92342000 Weak transcription Colon Smooth Muscle Colon
33 chr1:92338800-92342600 Weak transcription A549 lung
34 chr1:92338800-92343200 Weak transcription Liver Liver
35 chr1:92338800-92343200 Enhancers HepG2 liver
36 chr1:92338800-92343600 Weak transcription Hela-S3 cervix
37 chr1:92338800-92346800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
38 chr1:92338800-92350000 Weak transcription K562 blood
39 chr1:92339000-92341800 Weak transcription Primary T helper naive cells fromperipheralblood blood
40 chr1:92339400-92347200 Weak transcription Placenta Placenta
41 chr1:92340000-92341800 Weak transcription Spleen Spleen
42 chr1:92340000-92342000 Weak transcription Duodenum Smooth Muscle Duodenum
43 chr1:92340000-92349200 Weak transcription Lung lung
44 chr1:92340400-92341800 Enhancers GM12878-XiMat blood
45 chr1:92340400-92342200 Enhancers Primary T killer naive cells fromperipheralblood blood
46 chr1:92340400-92345800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
47 chr1:92340600-92341600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
48 chr1:92340600-92342200 Enhancers Skeletal Muscle Male skeletal muscle
49 chr1:92340600-92345200 Enhancers Primary T helper cells PMA-I stimulated --
50 chr1:92340600-92347600 Enhancers Fetal Adrenal Gland Adrenal Gland

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Last update: Aug 31, 2015