The 2.0 version of rSNPBase

Variant report

Variant rs72721079
Chromosome Location chr1:94188059-94188060
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:94179200-94188200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr1:94182400-94188600 Weak transcription Stomach Smooth Muscle stomach
3 chr1:94182600-94188200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr1:94183000-94188200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr1:94185400-94189800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
6 chr1:94185400-94190000 Enhancers Hela-S3 cervix
7 chr1:94185600-94189600 Enhancers HSMM muscle
8 chr1:94185600-94190400 Enhancers Fetal Muscle Leg muscle
9 chr1:94186000-94190800 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr1:94186400-94189000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
11 chr1:94186400-94189200 Enhancers Spleen Spleen
12 chr1:94186400-94189600 Enhancers Placenta Placenta
13 chr1:94186400-94189800 Enhancers Fetal Adrenal Gland Adrenal Gland
14 chr1:94186400-94190200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
15 chr1:94186400-94190400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
16 chr1:94186400-94190600 Enhancers Left Ventricle heart
17 chr1:94186600-94189600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr1:94186600-94190400 Enhancers Right Ventricle heart
19 chr1:94186600-94190800 Enhancers Right Atrium heart
20 chr1:94186800-94188200 Weak transcription Placenta Amnion Placenta Amnion
21 chr1:94186800-94189200 Enhancers Muscle Satellite Cultured Cells --
22 chr1:94186800-94189200 Enhancers HUVEC blood vessel
23 chr1:94186800-94189600 Enhancers NHDF-Ad bronchial
24 chr1:94186800-94190000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
25 chr1:94187000-94189000 Enhancers Aorta Aorta
26 chr1:94187000-94189200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr1:94187000-94189600 Enhancers Osteobl bone
28 chr1:94187000-94189800 Enhancers HSMMtube muscle
29 chr1:94187200-94188400 Flanking Active TSS Skeletal Muscle Male skeletal muscle
30 chr1:94187200-94188800 Weak transcription NHEK skin
31 chr1:94187200-94189000 Enhancers Breast Myoepithelial Primary Cells Breast
32 chr1:94187200-94189000 Enhancers Adipose Nuclei Adipose
33 chr1:94187200-94189000 Enhancers Lung lung
34 chr1:94187200-94189000 Enhancers Psoas Muscle Psoas
35 chr1:94187200-94189600 Enhancers ES-I3 Cell Line embryonic stem cell
36 chr1:94187200-94189600 Enhancers Pancreas Pancrea
37 chr1:94187200-94189800 Enhancers HUES6 Cell Line embryonic stem cell
38 chr1:94187200-94190200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
39 chr1:94187400-94188400 Enhancers Ovary ovary
40 chr1:94187400-94188600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr1:94187400-94188600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr1:94187400-94188600 Enhancers Duodenum Smooth Muscle Duodenum
43 chr1:94187400-94188800 Enhancers Fetal Heart heart
44 chr1:94187400-94189000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr1:94187400-94189400 Enhancers iPS-20b Cell Line embryonic stem cell
46 chr1:94187400-94189800 Enhancers HUES64 Cell Line embryonic stem cell
47 chr1:94187400-94190400 Enhancers Fetal Muscle Trunk muscle
48 chr1:94187600-94188400 Enhancers Gastric stomach
49 chr1:94187600-94188800 Enhancers ES-WA7 Cell Line embryonic stem cell
50 chr1:94187600-94189000 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived

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Last update: Aug 31, 2015