Variant report

Variant	rs72726495
Chromosome Location	chr4:143577959-143577960
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:143577881..143580712-chr4:143582795..143584320,2	MCF-7	breast:

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs17016514	0.85[AFR][1000 genomes]
rs72726477	0.90[AFR][1000 genomes]
rs894585	0.90[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830101	chr4:143518810-143684392	ZNF genes & repeats Enhancers Flanking Active TSS Weak transcription Strong transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Active TSS	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:143574400-143583800	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
2	chr4:143575400-143579000	ZNF genes & repeats	Primary hematopoietic stem cells	blood
3	chr4:143575400-143583800	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Female	--
4	chr4:143575600-143582400	ZNF genes & repeats	Dnd41	blood
5	chr4:143575800-143578400	ZNF genes & repeats	Liver	Liver
6	chr4:143575800-143578400	ZNF genes & repeats	Duodenum Smooth Muscle	Duodenum
7	chr4:143575800-143579800	ZNF genes & repeats	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
8	chr4:143576000-143578200	ZNF genes & repeats	Adipose Nuclei	Adipose
9	chr4:143576000-143578200	ZNF genes & repeats	Fetal Lung	lung
10	chr4:143576000-143578800	ZNF genes & repeats	Primary T helper cells PMA-I stimulated	--
11	chr4:143576200-143579800	ZNF genes & repeats	Primary T helper memory cells from peripheral blood 1	blood
12	chr4:143577000-143578200	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
13	chr4:143577000-143578400	ZNF genes & repeats	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
14	chr4:143577000-143578400	ZNF genes & repeats	Primary T helper naive cells from peripheral blood	blood
15	chr4:143577200-143578400	ZNF genes & repeats	Brain Cingulate Gyrus	brain
16	chr4:143577200-143578400	ZNF genes & repeats	Brain Hippocampus Middle	brain
17	chr4:143577200-143578600	ZNF genes & repeats	Fetal Heart	heart
18	chr4:143577200-143580000	ZNF genes & repeats	Primary T helper cells fromperipheralblood	blood
19	chr4:143577400-143578200	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
20	chr4:143577800-143578600	ZNF genes & repeats	Left Ventricle	heart

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