Variant report

Variant	rs72730420
Chromosome Location	chr4:143778140-143778141
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs11736709	0.80[ASN][1000 genomes]
rs4690710	0.80[EUR][1000 genomes]
rs4690729	0.84[ASN][1000 genomes]
rs58445560	0.80[ASN][1000 genomes]
rs6537129	0.84[ASN][1000 genomes]
rs6828896	0.84[ASN][1000 genomes]
rs72728681	0.87[ASN][1000 genomes]
rs7656375	0.80[ASN][1000 genomes]
rs7695461	0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv880174	chr4:143639498-143848024	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:143768600-143781200	Weak transcription	Psoas Muscle	Psoas
2	chr4:143777600-143779600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
3	chr4:143777800-143779000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
4	chr4:143777800-143779200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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