Variant report

Variant	rs72737267
Chromosome Location	chr1:215463944-215463945
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs10494997	0.97[ASN][1000 genomes]
rs11120528	0.82[ASN][1000 genomes]
rs11120531	0.82[ASN][1000 genomes]
rs11120540	0.97[ASN][1000 genomes]
rs11811604	0.80[ASN][1000 genomes]
rs12026152	0.82[ASN][1000 genomes]
rs12131712	0.92[ASN][1000 genomes]
rs12142076	0.95[ASN][1000 genomes]
rs1339399	0.97[ASN][1000 genomes]
rs1339400	1.00[ASN][1000 genomes]
rs1361342	0.92[ASN][1000 genomes]
rs1416651	0.97[ASN][1000 genomes]
rs1416656	0.97[ASN][1000 genomes]
rs2202679	0.97[ASN][1000 genomes]
rs4655280	0.97[ASN][1000 genomes]
rs7512197	0.97[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1014878	chr1:215453286-215527616	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv1003660	chr1:215453286-215529747	Enhancers Weak transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:215463000-215464000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
2	chr1:215463000-215464000	Enhancers	Osteobl	bone
3	chr1:215463000-215464200	Enhancers	Muscle Satellite Cultured Cells	--
4	chr1:215463200-215464000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
5	chr1:215463200-215464000	Enhancers	HSMM	muscle
6	chr1:215463200-215464200	Enhancers	NHDF-Ad	bronchial
7	chr1:215463600-215464000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
8	chr1:215463600-215464000	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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