Variant report

Variant rs72773026
Chromosome Location chr5:80820313-80820314
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:80779000-80830200 Weak transcription Primary B cells from cord blood blood
2 chr5:80779000-80834400 Weak transcription Fetal Muscle Leg muscle
3 chr5:80797000-80834000 Weak transcription Primary B cells from peripheral blood blood
4 chr5:80798400-80821400 Weak transcription Thymus Thymus
5 chr5:80798600-80826600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr5:80803200-80834400 Weak transcription Fetal Kidney kidney
7 chr5:80803200-80835200 Weak transcription GM12878-XiMat blood
8 chr5:80803600-80875200 Weak transcription Fetal Brain Female brain
9 chr5:80812400-80826600 Weak transcription Primary hematopoietic stem cells blood
10 chr5:80812400-80829200 Weak transcription Primary hematopoietic stem cells short term culture blood
11 chr5:80812600-80821400 Weak transcription HSMM muscle
12 chr5:80815600-80821400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
13 chr5:80817000-80827400 Weak transcription Primary T helper cells fromperipheralblood blood
14 chr5:80818000-80821800 Enhancers Breast Myoepithelial Primary Cells Breast
15 chr5:80818400-80822200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr5:80818600-80821800 Enhancers Fetal Heart heart
17 chr5:80819000-80820600 Weak transcription Left Ventricle heart
18 chr5:80819000-80820600 Weak transcription Psoas Muscle Psoas
19 chr5:80819000-80821400 Weak transcription Dnd41 blood
20 chr5:80819400-80821000 Enhancers Brain Substantia Nigra brain
21 chr5:80819600-80821800 Enhancers Cortex derived primary cultured neurospheres brain
22 chr5:80819800-80820800 Enhancers Brain Hippocampus Middle brain
23 chr5:80819800-80821200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
24 chr5:80820000-80820400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr5:80820000-80820800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
26 chr5:80820000-80820800 Enhancers Brain Angular Gyrus brain
27 chr5:80820000-80821400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
28 chr5:80820000-80821600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
29 chr5:80820000-80821600 Enhancers Brain Anterior Caudate brain
30 chr5:80820000-80829600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr5:80820200-80820800 Enhancers Brain Germinal Matrix brain
32 chr5:80820200-80820800 Enhancers Brain Dorsolateral Prefrontal Cortex brain
33 chr5:80820200-80821000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr5:80820200-80821000 Enhancers Brain Cingulate Gyrus brain
35 chr5:80820200-80821200 Weak transcription Pancreatic Islets Pancreatic Islet
36 chr5:80820200-80822400 Weak transcription Fetal Thymus thymus
37 chr5:80820200-80851800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived

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