The 2.0 version of rSNPBase

Variant report

Variant rs72774000
Chromosome Location chr2:11911981-11911982
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:11888400-11916400 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr2:11895000-11918200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
3 chr2:11900600-11918000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr2:11900800-11912200 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
5 chr2:11901200-11915000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr2:11901600-11914200 Weak transcription iPS-18 Cell Line embryonic stem cell
7 chr2:11901800-11914000 Strong transcription Primary T regulatory cells fromperipheralblood blood
8 chr2:11901800-11918600 Strong transcription Fetal Adrenal Gland Adrenal Gland
9 chr2:11902200-11913800 Strong transcription NHLF lung
10 chr2:11902800-11912200 Strong transcription Breast Myoepithelial Primary Cells Breast
11 chr2:11902800-11912400 Strong transcription Primary B cells from peripheral blood blood
12 chr2:11902800-11913800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
13 chr2:11903000-11913600 Strong transcription Primary T helper cells fromperipheralblood blood
14 chr2:11903000-11914200 Strong transcription Primary T helper cells PMA-I stimulated --
15 chr2:11903000-11915000 Strong transcription NHEK skin
16 chr2:11903200-11915000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
17 chr2:11903400-11914600 Strong transcription Dnd41 blood
18 chr2:11903800-11913800 Weak transcription HUES48 Cell Line embryonic stem cell
19 chr2:11903800-11914800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
20 chr2:11904000-11914600 Strong transcription Primary T helper naive cells fromperipheralblood blood
21 chr2:11904400-11914800 Strong transcription Primary B cells from cord blood blood
22 chr2:11904400-11914800 Strong transcription Primary T cells from cord blood blood
23 chr2:11905000-11914200 Strong transcription Primary T helper 17 cells PMA-I stimulated --
24 chr2:11905000-11915400 Strong transcription Monocytes-CD14+_RO01746 blood
25 chr2:11905200-11912600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr2:11905200-11915000 Strong transcription Sigmoid Colon Sigmoid Colon
27 chr2:11905200-11919000 Weak transcription Stomach Mucosa stomach
28 chr2:11905400-11914000 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
29 chr2:11905400-11914200 Strong transcription Primary T cells fromperipheralblood blood
30 chr2:11905400-11914400 Weak transcription Fetal Heart heart
31 chr2:11905400-11915600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr2:11905400-11916600 Strong transcription Stomach Smooth Muscle stomach
33 chr2:11905400-11916800 Strong transcription HUES6 Cell Line embryonic stem cell
34 chr2:11905600-11912200 Strong transcription NHDF-Ad bronchial
35 chr2:11905600-11912400 Strong transcription Liver Liver
36 chr2:11905600-11914200 Strong transcription HUVEC blood vessel
37 chr2:11905600-11914800 Strong transcription Duodenum Mucosa Duodenum
38 chr2:11905600-11915000 Strong transcription Adipose Nuclei Adipose
39 chr2:11905800-11912200 Strong transcription Left Ventricle heart
40 chr2:11905800-11914200 Strong transcription Skeletal Muscle Female skeletal muscle
41 chr2:11905800-11915200 Strong transcription Duodenum Smooth Muscle Duodenum
42 chr2:11906000-11914000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr2:11906000-11917400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
44 chr2:11906400-11924600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
45 chr2:11906600-11924800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
46 chr2:11906800-11924600 Weak transcription Cortex derived primary cultured neurospheres brain
47 chr2:11907000-11914000 Weak transcription ES-I3 Cell Line embryonic stem cell
48 chr2:11907200-11912200 Weak transcription Fetal Brain Male brain
49 chr2:11907200-11916800 Weak transcription iPS-15b Cell Line embryonic stem cell
50 chr2:11907400-11914200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain

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Last update: Aug 31, 2015